Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL11A1P12107 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
COL11A1P12107 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.09□□□□□ -1.76
COL11A1P12107 RNA5SP42-201ENST00000364278 115 ntBASIC4.09□□□□□ -1.76
COL11A1P12107 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.09□□□□□ -1.76
COL11A1P12107 AL122016.1-201ENST00000403365 367 ntBASIC4.09□□□□□ -1.76
COL11A1P12107 OR6C71P-201ENST00000432580 913 ntBASIC4.09□□□□□ -1.76
COL11A1P12107 AC104849.1-201ENST00000462623 405 ntBASIC4.09□□□□□ -1.76
COL11A1P12107 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
COL11A1P12107 ASNSP4-201ENST00000511103 447 ntBASIC4.09□□□□□ -1.76
COL11A1P12107 IGHV3-32-201ENST00000519182 355 ntBASIC4.09□□□□□ -1.76
COL11A1P12107 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.09□□□□□ -1.76
COL11A1P12107 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.09□□□□□ -1.76
COL11A1P12107 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.09□□□□□ -1.76
COL11A1P12107 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC4.09□□□□□ -1.76
COL11A1P12107 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.09□□□□□ -1.76
COL11A1P12107 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.09□□□□□ -1.76
COL11A1P12107 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.09□□□□□ -1.76
COL11A1P12107 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
COL11A1P12107 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
COL11A1P12107 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
COL11A1P12107 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL11A1P12107 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL11A1P12107 SAGE2P-201ENST00000420011 2126 ntBASIC4.08□□□□□ -1.76
COL11A1P12107 AC139426.3-201ENST00000605648 2059 ntBASIC4.08□□□□□ -1.76
COL11A1P12107 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
COL11A1P12107 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
COL11A1P12107 HLFP1-201ENST00000402375 499 ntBASIC4.08□□□□□ -1.76
COL11A1P12107 DPPA2P2-201ENST00000418220 897 ntBASIC4.08□□□□□ -1.76
COL11A1P12107 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.08□□□□□ -1.76
COL11A1P12107 AC092641.1-201ENST00000440229 772 ntBASIC4.08□□□□□ -1.76
COL11A1P12107 RPS4XP2-201ENST00000458402 793 ntBASIC4.08□□□□□ -1.76
COL11A1P12107 RPL5P16-201ENST00000471467 790 ntBASIC4.08□□□□□ -1.76
COL11A1P12107 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.08□□□□□ -1.76
COL11A1P12107 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.08□□□□□ -1.76
COL11A1P12107 AC109458.1-201ENST00000508858 316 ntBASIC4.08□□□□□ -1.76
COL11A1P12107 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC4.08□□□□□ -1.76
COL11A1P12107 AC005858.4-201ENST00000623191 700 ntBASIC4.08□□□□□ -1.76
COL11A1P12107 AC127502.3-201ENST00000636170 1206 ntBASIC4.08□□□□□ -1.76
COL11A1P12107 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL11A1P12107 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL11A1P12107 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
COL11A1P12107 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.08□□□□□ -1.76
COL11A1P12107 AL365440.1-201ENST00000436135 2167 ntBASIC4.07□□□□□ -1.76
COL11A1P12107 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL11A1P12107 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL11A1P12107 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL11A1P12107 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL11A1P12107 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.07□□□□□ -1.76
COL11A1P12107 BTF3P5-201ENST00000457252 467 ntBASIC4.07□□□□□ -1.76
COL11A1P12107 AC012123.2-201ENST00000485809 248 ntBASIC4.07□□□□□ -1.76
COL11A1P12107 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.07□□□□□ -1.76
COL11A1P12107 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.07□□□□□ -1.76
COL11A1P12107 AC010342.1-201ENST00000514047 877 ntBASIC4.07□□□□□ -1.76
COL11A1P12107 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC4.07□□□□□ -1.76
COL11A1P12107 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.07□□□□□ -1.76
COL11A1P12107 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.07□□□□□ -1.76
COL11A1P12107 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.07□□□□□ -1.76
COL11A1P12107 EIF1P6-201ENST00000600054 334 ntBASIC4.07□□□□□ -1.76
COL11A1P12107 AL139395.1-201ENST00000603662 160 ntBASIC4.07□□□□□ -1.76
COL11A1P12107 MIR8057-201ENST00000620957 69 ntBASIC4.07□□□□□ -1.76
COL11A1P12107 AC022149.2-201ENST00000621061 203 ntBASIC4.07□□□□□ -1.76
COL11A1P12107 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL11A1P12107 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL11A1P12107 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL11A1P12107 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL11A1P12107 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.07□□□□□ -1.76
COL11A1P12107 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
COL11A1P12107 AL078595.2-201ENST00000605309 1780 ntBASIC4.07□□□□□ -1.76
COL11A1P12107 AC118273.1-201ENST00000525324 3006 ntBASIC4.07□□□□□ -1.76
COL11A1P12107 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL11A1P12107 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
COL11A1P12107 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL11A1P12107 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
COL11A1P12107 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC4.07□□□□□ -1.76
COL11A1P12107 AL590609.2-201ENST00000421430 368 ntBASIC4.07□□□□□ -1.76
COL11A1P12107 AL512649.1-201ENST00000428997 581 ntBASIC4.07□□□□□ -1.76
COL11A1P12107 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.07□□□□□ -1.76
COL11A1P12107 AC092809.1-201ENST00000441469 474 ntBASIC4.07□□□□□ -1.76
COL11A1P12107 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.07□□□□□ -1.76
COL11A1P12107 SNORD105B-201ENST00000458770 79 ntBASIC4.07□□□□□ -1.76
COL11A1P12107 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.07□□□□□ -1.76
COL11A1P12107 AC016550.3-201ENST00000515706 767 ntBASIC4.07□□□□□ -1.76
COL11A1P12107 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.07□□□□□ -1.76
COL11A1P12107 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
COL11A1P12107 SULT1C2P2-201ENST00000562517 294 ntBASIC4.07□□□□□ -1.76
COL11A1P12107 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC4.07□□□□□ -1.76
COL11A1P12107 AC006116.10-201ENST00000591836 581 ntBASIC4.07□□□□□ -1.76
COL11A1P12107 AC244517.3-201ENST00000616254 1235 ntBASIC4.07□□□□□ -1.76
COL11A1P12107 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.07□□□□□ -1.76
COL11A1P12107 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.07□□□□□ -1.76
COL11A1P12107 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL11A1P12107 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
COL11A1P12107 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
COL11A1P12107 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.06□□□□□ -1.76
COL11A1P12107 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
COL11A1P12107 AC093849.1-201ENST00000563631 2209 ntBASIC4.06□□□□□ -1.76
COL11A1P12107 AC007656.2-201ENST00000624902 4547 ntBASIC4.06□□□□□ -1.76
COL11A1P12107 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.06□□□□□ -1.76
COL11A1P12107 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms