Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AL512646.1-201ENST00000269395 1077 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 RNU1-106P-201ENST00000384382 164 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 RNU6-297P-201ENST00000384636 107 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 RNU6-1151P-201ENST00000384684 107 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 RNU6-780P-201ENST00000391030 104 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AC007066.1-201ENST00000392902 381 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 RN7SKP285-201ENST00000410137 318 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AC013429.2-201ENST00000418798 781 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AC015977.1-201ENST00000418887 292 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 SDCBPP3-201ENST00000419629 891 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AC009237.2-201ENST00000421358 284 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 MTND2P23-201ENST00000422990 651 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 ZYG11AP1-201ENST00000430329 837 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 MTCO3P21-201ENST00000430791 643 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 PSMD10P3-201ENST00000437000 448 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 LDHAP2-201ENST00000437325 985 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 H2AFZP6-201ENST00000444403 394 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 RN7SL860P-201ENST00000473738 223 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 SNORA48.10-201ENST00000516965 160 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AC239860.2-201ENST00000525886 270 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AP003072.1-201ENST00000531740 145 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AC137768.1-201ENST00000549998 553 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AC125611.2-201ENST00000551907 647 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AC126615.2-201ENST00000553003 515 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 PCMTD1P2-201ENST00000565017 355 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 OR1F2P-201ENST00000570470 933 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AC008752.3-201ENST00000588113 712 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 LLPHP1-201ENST00000603571 367 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AL020991.1-201ENST00000612314 373 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AC120349.2-201ENST00000625002 298 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 LINC01963-201ENST00000562038 3148 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AL034546.1-201ENST00000623740 3693 ntBASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CSB-PGBD3P0DP91 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.46□□□□□ -1.21
CSB-PGBD3P0DP91 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
CSB-PGBD3P0DP91 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.46□□□□□ -1.21
CSB-PGBD3P0DP91 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC7.46□□□□□ -1.21
CSB-PGBD3P0DP91 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
CSB-PGBD3P0DP91 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
CSB-PGBD3P0DP91 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
CSB-PGBD3P0DP91 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 U3.2-201ENST00000362981 210 ntBASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 AC116036.1-201ENST00000412199 367 ntBASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 FCF1P2-201ENST00000415284 583 ntBASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 AC092647.1-201ENST00000420654 287 ntBASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 SETP9-201ENST00000423837 832 ntBASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 AC073464.1-201ENST00000429823 534 ntBASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 AC096775.1-201ENST00000437724 448 ntBASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 AL022238.1-201ENST00000442557 355 ntBASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 AHI1-208ENST00000488690 712 ntTSL 5 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC7.46□□□□□ -1.22
CSB-PGBD3P0DP91 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms