Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 CALM1P2-201ENST00000452941 448 ntBASIC4.29□□□□□ -1.72
TPM3P06753 SNRPGP3-201ENST00000469405 227 ntBASIC4.29□□□□□ -1.72
TPM3P06753 AL132838.2-201ENST00000492041 314 ntBASIC4.29□□□□□ -1.72
TPM3P06753 UBE2CP3-201ENST00000502715 450 ntBASIC4.29□□□□□ -1.72
TPM3P06753 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TPM3P06753 AC108475.1-201ENST00000507880 950 ntBASIC4.29□□□□□ -1.72
TPM3P06753 AC063949.1-201ENST00000552900 865 ntBASIC4.29□□□□□ -1.72
TPM3P06753 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.29□□□□□ -1.72
TPM3P06753 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC4.29□□□□□ -1.72
TPM3P06753 AC092653.1-201ENST00000608509 531 ntBASIC4.29□□□□□ -1.72
TPM3P06753 MIR6868-201ENST00000611215 58 ntBASIC4.29□□□□□ -1.72
TPM3P06753 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.29□□□□□ -1.72
TPM3P06753 AC092628.2-201ENST00000622492 339 ntBASIC4.29□□□□□ -1.72
TPM3P06753 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TPM3P06753 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TPM3P06753 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TPM3P06753 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TPM3P06753 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TPM3P06753 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC4.28□□□□□ -1.72
TPM3P06753 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.28□□□□□ -1.72
TPM3P06753 RNA5SP443-201ENST00000363083 132 ntBASIC4.28□□□□□ -1.72
TPM3P06753 RNVU1-6-201ENST00000364688 164 ntBASIC4.28□□□□□ -1.72
TPM3P06753 RNU6-283P-201ENST00000364788 107 ntBASIC4.28□□□□□ -1.72
TPM3P06753 MIR124-3-201ENST00000384866 87 ntBASIC4.28□□□□□ -1.72
TPM3P06753 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TPM3P06753 RPS26P8-201ENST00000393490 348 ntBASIC4.28□□□□□ -1.72
TPM3P06753 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.28□□□□□ -1.72
TPM3P06753 AL034403.1-201ENST00000399414 885 ntBASIC4.28□□□□□ -1.72
TPM3P06753 AL133270.1-201ENST00000402635 279 ntBASIC4.28□□□□□ -1.72
TPM3P06753 AL034374.1-201ENST00000406329 351 ntBASIC4.28□□□□□ -1.72
TPM3P06753 RPL31P12-201ENST00000422587 358 ntBASIC4.28□□□□□ -1.72
TPM3P06753 HIGD1AP12-201ENST00000427832 281 ntBASIC4.28□□□□□ -1.72
TPM3P06753 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.28□□□□□ -1.72
TPM3P06753 AL772161.1-201ENST00000439130 476 ntBASIC4.28□□□□□ -1.72
TPM3P06753 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.28□□□□□ -1.72
TPM3P06753 CBX1P1-201ENST00000440184 427 ntBASIC4.28□□□□□ -1.72
TPM3P06753 OR2AF1P-201ENST00000454899 889 ntBASIC4.28□□□□□ -1.72
TPM3P06753 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.28□□□□□ -1.72
TPM3P06753 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.28□□□□□ -1.72
TPM3P06753 AC117394.1-201ENST00000477323 567 ntBASIC4.28□□□□□ -1.72
TPM3P06753 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.28□□□□□ -1.72
TPM3P06753 NDUFA5P12-201ENST00000503796 343 ntBASIC4.28□□□□□ -1.72
TPM3P06753 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.28□□□□□ -1.72
TPM3P06753 ZNF346-IT1-201ENST00000515264 745 ntTSL 3 BASIC4.28□□□□□ -1.72
TPM3P06753 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.28□□□□□ -1.72
TPM3P06753 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.28□□□□□ -1.72
TPM3P06753 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.28□□□□□ -1.72
TPM3P06753 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.28□□□□□ -1.72
TPM3P06753 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.28□□□□□ -1.72
TPM3P06753 AC006254.3-201ENST00000603353 884 ntBASIC4.28□□□□□ -1.72
TPM3P06753 AC010680.4-201ENST00000605334 543 ntBASIC4.28□□□□□ -1.72
TPM3P06753 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.28□□□□□ -1.72
TPM3P06753 AC007620.3-201ENST00000608131 497 ntBASIC4.28□□□□□ -1.72
TPM3P06753 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4.28□□□□□ -1.72
TPM3P06753 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC4.28□□□□□ -1.72
TPM3P06753 AC105105.5-201ENST00000622635 1294 ntBASIC4.28□□□□□ -1.72
TPM3P06753 AC010608.2-201ENST00000624830 470 ntBASIC4.28□□□□□ -1.72
TPM3P06753 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.28□□□□□ -1.72
TPM3P06753 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TPM3P06753 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.28□□□□□ -1.72
TPM3P06753 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TPM3P06753 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.28□□□□□ -1.73
TPM3P06753 AC017002.4-201ENST00000604721 1525 ntBASIC4.27□□□□□ -1.73
TPM3P06753 AL133383.2-201ENST00000622958 2336 ntBASIC4.27□□□□□ -1.73
TPM3P06753 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TPM3P06753 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TPM3P06753 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TPM3P06753 RNA5SP167-201ENST00000365461 116 ntBASIC4.27□□□□□ -1.73
TPM3P06753 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.27□□□□□ -1.73
TPM3P06753 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TPM3P06753 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TPM3P06753 RNU11-4P-201ENST00000391149 133 ntBASIC4.27□□□□□ -1.73
TPM3P06753 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TPM3P06753 MTCO3P31-201ENST00000405526 789 ntBASIC4.27□□□□□ -1.73
TPM3P06753 ELOCP19-201ENST00000411919 318 ntBASIC4.27□□□□□ -1.73
TPM3P06753 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.27□□□□□ -1.73
TPM3P06753 AL139128.1-201ENST00000413921 941 ntBASIC4.27□□□□□ -1.73
TPM3P06753 RPL23AP38-201ENST00000423801 469 ntBASIC4.27□□□□□ -1.73
TPM3P06753 AC006989.1-201ENST00000427212 131 ntBASIC4.27□□□□□ -1.73
TPM3P06753 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.27□□□□□ -1.73
TPM3P06753 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.27□□□□□ -1.73
TPM3P06753 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.27□□□□□ -1.73
TPM3P06753 AC245517.2-201ENST00000442890 346 ntBASIC4.27□□□□□ -1.73
TPM3P06753 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
TPM3P06753 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC4.27□□□□□ -1.73
TPM3P06753 AC010468.1-201ENST00000461022 817 ntBASIC4.27□□□□□ -1.73
TPM3P06753 AP000893.1-201ENST00000474462 794 ntBASIC4.27□□□□□ -1.73
TPM3P06753 AC084198.1-201ENST00000477747 402 ntBASIC4.27□□□□□ -1.73
TPM3P06753 AC092451.1-201ENST00000480211 153 ntBASIC4.27□□□□□ -1.73
TPM3P06753 LARP7P4-201ENST00000481075 878 ntBASIC4.27□□□□□ -1.73
TPM3P06753 AC041039.1-201ENST00000485656 536 ntBASIC4.27□□□□□ -1.73
TPM3P06753 RPS27AP13-201ENST00000498403 237 ntBASIC4.27□□□□□ -1.73
TPM3P06753 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.27□□□□□ -1.73
TPM3P06753 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC4.27□□□□□ -1.73
TPM3P06753 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.27□□□□□ -1.73
TPM3P06753 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.27□□□□□ -1.73
TPM3P06753 AC087888.1-201ENST00000550884 1254 ntBASIC4.27□□□□□ -1.73
TPM3P06753 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.27□□□□□ -1.73
TPM3P06753 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.27□□□□□ -1.73
TPM3P06753 AC068831.4-201ENST00000556118 109 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 516.4 ms