Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5□□□□□ -1.61
PROM1O43490 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5□□□□□ -1.61
PROM1O43490 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PROM1O43490 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PROM1O43490 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
PROM1O43490 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PROM1O43490 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
PROM1O43490 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
PROM1O43490 AC103591.2-201ENST00000265259 766 ntBASIC4.99□□□□□ -1.61
PROM1O43490 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.99□□□□□ -1.61
PROM1O43490 RNA5SP507-201ENST00000363603 121 ntBASIC4.99□□□□□ -1.61
PROM1O43490 SNORA62.2-201ENST00000364672 152 ntBASIC4.99□□□□□ -1.61
PROM1O43490 MIR105-1-201ENST00000385222 81 ntBASIC4.99□□□□□ -1.61
PROM1O43490 RNU1-149P-201ENST00000390870 161 ntBASIC4.99□□□□□ -1.61
PROM1O43490 AL512430.2-201ENST00000406786 339 ntBASIC4.99□□□□□ -1.61
PROM1O43490 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.99□□□□□ -1.61
PROM1O43490 RN7SKP125-201ENST00000410481 302 ntBASIC4.99□□□□□ -1.61
PROM1O43490 RNU2-16P-201ENST00000410712 136 ntBASIC4.99□□□□□ -1.61
PROM1O43490 RPL37P18-201ENST00000411602 243 ntBASIC4.99□□□□□ -1.61
PROM1O43490 TPMTP3-201ENST00000411928 735 ntBASIC4.99□□□□□ -1.61
PROM1O43490 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.99□□□□□ -1.61
PROM1O43490 RPL23AP27-201ENST00000415161 451 ntBASIC4.99□□□□□ -1.61
PROM1O43490 AC019050.1-201ENST00000418508 492 ntBASIC4.99□□□□□ -1.61
PROM1O43490 AC114814.2-201ENST00000419195 485 ntBASIC4.99□□□□□ -1.61
PROM1O43490 OFD1P2Y-201ENST00000421895 1149 ntBASIC4.99□□□□□ -1.61
PROM1O43490 AC093655.2-201ENST00000425735 631 ntBASIC4.99□□□□□ -1.61
PROM1O43490 AL158073.1-201ENST00000426848 1104 ntBASIC4.99□□□□□ -1.61
PROM1O43490 MTATP6P13-201ENST00000438531 667 ntBASIC4.99□□□□□ -1.61
PROM1O43490 RPL12P3-201ENST00000440080 396 ntBASIC4.99□□□□□ -1.61
PROM1O43490 CNOT7P2-201ENST00000441051 832 ntBASIC4.99□□□□□ -1.61
PROM1O43490 PTMAP3-201ENST00000447474 330 ntBASIC4.99□□□□□ -1.61
PROM1O43490 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC4.99□□□□□ -1.61
PROM1O43490 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC4.99□□□□□ -1.61
PROM1O43490 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.99□□□□□ -1.61
PROM1O43490 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.99□□□□□ -1.61
PROM1O43490 RN7SL172P-201ENST00000460535 303 ntBASIC4.99□□□□□ -1.61
PROM1O43490 RPL5P24-201ENST00000463742 885 ntBASIC4.99□□□□□ -1.61
PROM1O43490 AC021660.1-201ENST00000465006 554 ntBASIC4.99□□□□□ -1.61
PROM1O43490 RN7SL860P-201ENST00000473738 223 ntBASIC4.99□□□□□ -1.61
PROM1O43490 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PROM1O43490 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.99□□□□□ -1.61
PROM1O43490 SETP14-201ENST00000497538 873 ntBASIC4.99□□□□□ -1.61
PROM1O43490 AC104685.1-201ENST00000502445 371 ntBASIC4.99□□□□□ -1.61
PROM1O43490 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.99□□□□□ -1.61
PROM1O43490 AC024558.1-201ENST00000505008 528 ntBASIC4.99□□□□□ -1.61
PROM1O43490 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.99□□□□□ -1.61
PROM1O43490 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.99□□□□□ -1.61
PROM1O43490 HMGB1P23-201ENST00000518743 568 ntBASIC4.99□□□□□ -1.61
PROM1O43490 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC4.99□□□□□ -1.61
PROM1O43490 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.99□□□□□ -1.61
PROM1O43490 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.99□□□□□ -1.61
PROM1O43490 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.99□□□□□ -1.61
PROM1O43490 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.99□□□□□ -1.61
PROM1O43490 AC040958.1-201ENST00000561102 201 ntBASIC4.99□□□□□ -1.61
PROM1O43490 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.99□□□□□ -1.61
PROM1O43490 AP003465.2-201ENST00000602571 373 ntBASIC4.99□□□□□ -1.61
PROM1O43490 AC079089.3-201ENST00000603094 673 ntBASIC4.99□□□□□ -1.61
PROM1O43490 AC011453.2-201ENST00000603737 729 ntBASIC4.99□□□□□ -1.61
PROM1O43490 AL031775.1-201ENST00000607014 887 ntBASIC4.99□□□□□ -1.61
PROM1O43490 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
PROM1O43490 MIR6839-201ENST00000620425 113 ntBASIC4.99□□□□□ -1.61
PROM1O43490 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.99□□□□□ -1.61
PROM1O43490 AC091932.2-201ENST00000623014 291 ntBASIC4.99□□□□□ -1.61
PROM1O43490 AL160394.1-201ENST00000624765 724 ntBASIC4.99□□□□□ -1.61
PROM1O43490 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC4.99□□□□□ -1.61
PROM1O43490 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.99□□□□□ -1.61
PROM1O43490 PCMTD1P7-201ENST00000634506 357 ntBASIC4.99□□□□□ -1.61
PROM1O43490 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
PROM1O43490 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PROM1O43490 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
PROM1O43490 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.99□□□□□ -1.61
PROM1O43490 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
PROM1O43490 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.99□□□□□ -1.61
PROM1O43490 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PROM1O43490 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.99□□□□□ -1.61
PROM1O43490 DDX18P3-201ENST00000404856 2007 ntBASIC4.99□□□□□ -1.61
PROM1O43490 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
PROM1O43490 AC023421.1-201ENST00000590535 1785 ntBASIC4.99□□□□□ -1.61
PROM1O43490 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
PROM1O43490 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PROM1O43490 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
PROM1O43490 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC4.98□□□□□ -1.61
PROM1O43490 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
PROM1O43490 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.98□□□□□ -1.61
PROM1O43490 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PROM1O43490 AL034549.2-201ENST00000618285 3373 ntBASIC4.98□□□□□ -1.61
PROM1O43490 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
PROM1O43490 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.98□□□□□ -1.61
PROM1O43490 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
PROM1O43490 SNORA67-201ENST00000384423 137 ntBASIC4.98□□□□□ -1.61
PROM1O43490 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PROM1O43490 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.98□□□□□ -1.61
PROM1O43490 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.98□□□□□ -1.61
PROM1O43490 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.98□□□□□ -1.61
PROM1O43490 RPL7P44-201ENST00000424827 742 ntBASIC4.98□□□□□ -1.61
PROM1O43490 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.98□□□□□ -1.61
PROM1O43490 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC4.98□□□□□ -1.61
PROM1O43490 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC4.98□□□□□ -1.61
PROM1O43490 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.98□□□□□ -1.61
PROM1O43490 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms