Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 UBE3AP2-201ENST00000429033 2259 ntBASIC5.06□□□□□ -1.6
CHD2O14647 AC008079.2-201ENST00000623543 20396 ntBASIC5.06□□□□□ -1.6
CHD2O14647 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD2O14647 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD2O14647 SNORA38.1-201ENST00000364172 131 ntBASIC5.06□□□□□ -1.6
CHD2O14647 NACAP7-201ENST00000407371 609 ntBASIC5.06□□□□□ -1.6
CHD2O14647 RPF2P1-201ENST00000424137 906 ntBASIC5.06□□□□□ -1.6
CHD2O14647 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.06□□□□□ -1.6
CHD2O14647 Vault.1-201ENST00000516474 102 ntBASIC5.06□□□□□ -1.6
CHD2O14647 AC244517.3-201ENST00000616254 1235 ntBASIC5.06□□□□□ -1.6
CHD2O14647 AC074276.2-201ENST00000619891 348 ntBASIC5.06□□□□□ -1.6
CHD2O14647 U4.6-201ENST00000621618 127 ntBASIC5.06□□□□□ -1.6
CHD2O14647 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC5.06□□□□□ -1.6
CHD2O14647 AC119674.1-212ENST00000641155 993 ntBASIC5.06□□□□□ -1.6
CHD2O14647 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD2O14647 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD2O14647 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CHD2O14647 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.06□□□□□ -1.6
CHD2O14647 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC5.06□□□□□ -1.6
CHD2O14647 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD2O14647 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
CHD2O14647 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHD2O14647 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHD2O14647 KCTD9P3-201ENST00000434597 1169 ntBASIC5.05□□□□□ -1.6
CHD2O14647 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC5.05□□□□□ -1.6
CHD2O14647 RNA5SP154-201ENST00000516193 111 ntBASIC5.05□□□□□ -1.6
CHD2O14647 MYL12AP1-201ENST00000518490 515 ntBASIC5.05□□□□□ -1.6
CHD2O14647 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
CHD2O14647 CKS1BP3-201ENST00000600888 237 ntBASIC5.05□□□□□ -1.6
CHD2O14647 AL606834.2-201ENST00000602954 668 ntBASIC5.05□□□□□ -1.6
CHD2O14647 MTCO3P22-201ENST00000603219 784 ntBASIC5.05□□□□□ -1.6
CHD2O14647 AL390816.3-201ENST00000604527 1066 ntBASIC5.05□□□□□ -1.6
CHD2O14647 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHD2O14647 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHD2O14647 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHD2O14647 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHD2O14647 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.05□□□□□ -1.6
CHD2O14647 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHD2O14647 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CHD2O14647 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CHD2O14647 AC093535.2-201ENST00000624769 2326 ntBASIC5.05□□□□□ -1.6
CHD2O14647 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHD2O14647 SGO1-AS1-203ENST00000455626 2041 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CHD2O14647 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CHD2O14647 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD2O14647 UBE2V1P1-201ENST00000430836 445 ntBASIC5.04□□□□□ -1.6
CHD2O14647 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC5.04□□□□□ -1.6
CHD2O14647 HLA-N-201ENST00000437516 135 ntBASIC5.04□□□□□ -1.6
CHD2O14647 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC5.04□□□□□ -1.6
CHD2O14647 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.04□□□□□ -1.6
CHD2O14647 MTND6P5-201ENST00000448266 512 ntBASIC5.04□□□□□ -1.6
CHD2O14647 AC006480.1-201ENST00000449887 378 ntBASIC5.04□□□□□ -1.6
CHD2O14647 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC5.04□□□□□ -1.6
CHD2O14647 TMED11P-201ENST00000479478 690 ntBASIC5.04□□□□□ -1.6
CHD2O14647 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.04□□□□□ -1.6
CHD2O14647 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHD2O14647 AC011611.1-201ENST00000552179 197 ntBASIC5.04□□□□□ -1.6
CHD2O14647 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC5.04□□□□□ -1.6
CHD2O14647 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD2O14647 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD2O14647 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CHD2O14647 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
CHD2O14647 VN1R51P-201ENST00000411675 945 ntBASIC5.04□□□□□ -1.6
CHD2O14647 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.04□□□□□ -1.6
CHD2O14647 ARL6IP1P2-201ENST00000431356 563 ntBASIC5.04□□□□□ -1.6
CHD2O14647 RPSAP41-201ENST00000439695 860 ntBASIC5.04□□□□□ -1.6
CHD2O14647 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.04□□□□□ -1.6
CHD2O14647 S100A11P2-201ENST00000467589 312 ntBASIC5.04□□□□□ -1.6
CHD2O14647 RPL21P13-201ENST00000488305 481 ntBASIC5.04□□□□□ -1.6
CHD2O14647 ASNSP4-201ENST00000511103 447 ntBASIC5.04□□□□□ -1.6
CHD2O14647 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.04□□□□□ -1.6
CHD2O14647 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.04□□□□□ -1.6
CHD2O14647 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
CHD2O14647 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
CHD2O14647 AC026422.1-201ENST00000623961 452 ntBASIC5.04□□□□□ -1.6
CHD2O14647 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.04□□□□□ -1.6
CHD2O14647 AC090337.1-201ENST00000579651 2074 ntBASIC5.04□□□□□ -1.6
CHD2O14647 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHD2O14647 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHD2O14647 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHD2O14647 AC112198.2-201ENST00000426589 6996 ntBASIC5.03□□□□□ -1.6
CHD2O14647 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHD2O14647 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.03□□□□□ -1.6
CHD2O14647 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CHD2O14647 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CHD2O14647 AC017079.2-201ENST00000416102 485 ntBASIC5.03□□□□□ -1.6
CHD2O14647 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHD2O14647 NANOGNBP1-201ENST00000448444 480 ntBASIC5.03□□□□□ -1.6
CHD2O14647 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC5.03□□□□□ -1.6
CHD2O14647 RPL5P16-201ENST00000471467 790 ntBASIC5.03□□□□□ -1.6
CHD2O14647 AC096576.1-201ENST00000489014 359 ntBASIC5.03□□□□□ -1.6
CHD2O14647 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.03□□□□□ -1.6
CHD2O14647 AC090877.1-201ENST00000561418 344 ntBASIC5.03□□□□□ -1.6
CHD2O14647 AC006386.2-201ENST00000624491 75 ntBASIC5.03□□□□□ -1.6
CHD2O14647 AC012005.1-201ENST00000624575 75 ntBASIC5.03□□□□□ -1.6
CHD2O14647 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
CHD2O14647 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CHD2O14647 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
CHD2O14647 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC5.03□□□□□ -1.6
CHD2O14647 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms