Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM38O00635 CHEK2P3-201ENST00000416118 248 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 RPS24P7-201ENST00000416921 246 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 QRSL1P2-201ENST00000418582 964 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM38O00635 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM38O00635 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM38O00635 AC007435.1-201ENST00000421086 415 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM38O00635 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM38O00635 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM38O00635 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM38O00635 RPS29P10-201ENST00000439197 166 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 AC004865.1-201ENST00000442276 1003 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM38O00635 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM38O00635 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM38O00635 AC079776.3-201ENST00000450665 370 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 BX842559.2-201ENST00000451418 605 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM38O00635 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM38O00635 AC079168.1-201ENST00000458741 345 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 RN7SL738P-201ENST00000470264 297 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC5.06□□□□□ -1.6
TRIM38O00635 HMGB3P16-201ENST00000508037 287 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 BTF3P13-201ENST00000513224 490 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 RN7SKP260-201ENST00000516907 149 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 AC105031.1-201ENST00000518550 476 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC5.06□□□□□ -1.6
TRIM38O00635 EDDM3DP-201ENST00000554692 434 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.06□□□□□ -1.6
TRIM38O00635 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM38O00635 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.06□□□□□ -1.6
TRIM38O00635 AC068790.6-201ENST00000602558 258 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 AC093765.1-201ENST00000603758 881 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 AP003973.1-201ENST00000604639 691 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 AC073534.2-201ENST00000620377 381 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM38O00635 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.06□□□□□ -1.6
TRIM38O00635 AC007529.1-201ENST00000418574 2178 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TRIM38O00635 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM38O00635 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM38O00635 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
TRIM38O00635 XPOTP1-201ENST00000443317 2398 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 SLC2A3P1-201ENST00000519666 1451 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
TRIM38O00635 AL356473.1-201ENST00000406203 1408 ntBASIC5.06□□□□□ -1.6
TRIM38O00635 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TRIM38O00635 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM38O00635 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM38O00635 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM38O00635 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
TRIM38O00635 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM38O00635 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM38O00635 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM38O00635 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
TRIM38O00635 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
TRIM38O00635 RNA5SP223-201ENST00000365174 120 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 MIR589-201ENST00000385238 99 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 RNU6-192P-201ENST00000391253 100 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 VDAC2P1-201ENST00000399358 958 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 AL121978.1-201ENST00000402778 359 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 AL359643.1-201ENST00000404109 423 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 MIR1271-201ENST00000408537 86 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM38O00635 RN7SKP114-201ENST00000410327 279 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 ELOCP9-201ENST00000418624 239 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM38O00635 AL590609.2-201ENST00000421430 368 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM38O00635 IPMKP1-201ENST00000425988 855 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.05□□□□□ -1.6
TRIM38O00635 RPL37P1-201ENST00000432310 284 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 RPL35AP21-201ENST00000437667 333 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 USP9YP22-201ENST00000438971 294 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 KNOP1P3-201ENST00000446933 426 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 RPL30P11-201ENST00000495304 339 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM38O00635 MTCYBP16-201ENST00000509187 1129 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 RPL7L1P13-201ENST00000511702 739 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 RNU6-488P-201ENST00000515918 99 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM38O00635 MRPS36P3-201ENST00000519284 130 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
TRIM38O00635 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM38O00635 AC021006.3-201ENST00000530771 192 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 MTCO2P15-201ENST00000532655 656 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.05□□□□□ -1.6
TRIM38O00635 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM38O00635 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM38O00635 AC090888.1-201ENST00000561335 1141 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 AC009117.1-201ENST00000563948 554 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 AC109446.2-201ENST00000567872 497 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.05□□□□□ -1.6
TRIM38O00635 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM38O00635 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC5.05□□□□□ -1.6
TRIM38O00635 AL109653.1-201ENST00000603091 248 ntBASIC5.05□□□□□ -1.6
TRIM38O00635 AC080078.2-201ENST00000603766 501 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms