Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CCDC188H7C350 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CCDC188H7C350 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC188H7C350 RNU1-130P-201ENST00000363930 160 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC188H7C350 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC188H7C350 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
CCDC188H7C350 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CCDC188H7C350 SNORA37-201ENST00000384504 129 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 SNORD65C-201ENST00000390962 71 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 AL645927.1-201ENST00000396783 406 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 STAT4-203ENST00000409995 709 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC188H7C350 AL139095.3-201ENST00000419672 1203 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC188H7C350 AL645931.1-201ENST00000439737 410 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 AC002542.1-201ENST00000440683 193 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 HMGB1P48-201ENST00000446155 598 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 AL929288.2-201ENST00000446368 407 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 RPL23AP15-201ENST00000450202 459 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC188H7C350 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 AC091685.2-201ENST00000454924 864 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 BX248409.1-201ENST00000455497 255 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 RN7SL329P-201ENST00000467740 299 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.43□□□□□ -1.7
CCDC188H7C350 MTATP6P22-201ENST00000507369 598 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 AC110792.2-201ENST00000510278 224 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 AC092593.2-201ENST00000513866 913 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 RN7SKP96-201ENST00000516948 297 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC188H7C350 AL360157.1-201ENST00000565962 87 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC188H7C350 AC126365.2-201ENST00000580630 379 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC188H7C350 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC188H7C350 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.43□□□□□ -1.7
CCDC188H7C350 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC188H7C350 AL138955.1-201ENST00000622881 1040 ntBASIC4.43□□□□□ -1.7
CCDC188H7C350 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC188H7C350 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.43□□□□□ -1.7
CCDC188H7C350 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CCDC188H7C350 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CCDC188H7C350 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CCDC188H7C350 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CCDC188H7C350 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC188H7C350 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CCDC188H7C350 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CCDC188H7C350 MTCO1P6-201ENST00000481192 1384 ntBASIC4.42□□□□□ -1.7
CCDC188H7C350 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
CCDC188H7C350 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC188H7C350 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC188H7C350 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC188H7C350 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC188H7C350 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CCDC188H7C350 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC188H7C350 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC188H7C350 AC007529.1-201ENST00000418574 2178 ntBASIC4.42□□□□□ -1.7
CCDC188H7C350 AC012497.1-201ENST00000429392 575 ntBASIC4.42□□□□□ -1.7
CCDC188H7C350 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC188H7C350 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC188H7C350 RNF2P1-201ENST00000442955 1010 ntBASIC4.42□□□□□ -1.7
CCDC188H7C350 AL121877.1-201ENST00000453704 622 ntBASIC4.42□□□□□ -1.7
CCDC188H7C350 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC188H7C350 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC188H7C350 RPL21P18-201ENST00000469899 480 ntBASIC4.42□□□□□ -1.7
CCDC188H7C350 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC188H7C350 RN7SL808P-201ENST00000496066 299 ntBASIC4.42□□□□□ -1.7
CCDC188H7C350 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC188H7C350 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC188H7C350 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC188H7C350 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.42□□□□□ -1.7
CCDC188H7C350 AC104115.2-201ENST00000523026 687 ntBASIC4.42□□□□□ -1.7
CCDC188H7C350 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC188H7C350 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.42□□□□□ -1.7
CCDC188H7C350 RN7SL690P-201ENST00000582087 240 ntBASIC4.42□□□□□ -1.7
CCDC188H7C350 AC006116.7-201ENST00000590141 756 ntBASIC4.42□□□□□ -1.7
CCDC188H7C350 AC068620.3-201ENST00000602749 560 ntBASIC4.42□□□□□ -1.7
CCDC188H7C350 AC009948.4-201ENST00000604692 675 ntBASIC4.42□□□□□ -1.7
CCDC188H7C350 RMST_9.1-201ENST00000619945 193 ntBASIC4.42□□□□□ -1.7
CCDC188H7C350 AP006248.2-201ENST00000623309 592 ntBASIC4.42□□□□□ -1.7
CCDC188H7C350 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC188H7C350 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC188H7C350 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC188H7C350 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CCDC188H7C350 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.42□□□□□ -1.7
CCDC188H7C350 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4.42□□□□□ -1.7
CCDC188H7C350 NSRP1P1-201ENST00000444067 1693 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC188H7C350 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CCDC188H7C350 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC188H7C350 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.41□□□□□ -1.7
CCDC188H7C350 AC008033.1-201ENST00000216407 1162 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 AC234772.1-201ENST00000377927 937 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CCDC188H7C350 RNA5SP332-201ENST00000391063 115 ntBASIC4.41□□□□□ -1.7
CCDC188H7C350 AL049697.2-201ENST00000403708 294 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms