Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC004980.4-201ENST00000513375 203 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 RNU4-60P-201ENST00000517239 135 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 NAT2-202ENST00000520116 716 ntTSL 3 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 IGKV2-4-201ENST00000523070 340 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 MORF4L1P3-201ENST00000525966 950 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC006512.2-201ENST00000543250 486 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 OR4U1P-201ENST00000554958 912 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC022404.1-201ENST00000555320 273 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC078899.3-201ENST00000599065 212 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC007546.1-201ENST00000619452 559 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC090617.7-201ENST00000623952 126 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 CDRT1-208ENST00000630868 794 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC136428.4-201ENST00000634254 1155 ntBASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
CHKB-CPT1BH3BT56 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 SNORD56.3-201ENST00000363507 71 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 RN7SKP222-201ENST00000410651 315 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AC007899.1-201ENST00000412776 775 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AC093578.1-201ENST00000415219 368 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 RAB9AP4-201ENST00000415230 609 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 OR1AA1P-201ENST00000419597 916 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AL139281.1-201ENST00000422120 335 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AP001324.1-201ENST00000428553 399 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 FGF12-202ENST00000430714 603 ntTSL 2 BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 MOB1AP1-201ENST00000430903 535 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 IGKV1OR9-2-201ENST00000431378 277 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AL354893.1-201ENST00000433735 348 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 CALM1P2-201ENST00000452941 448 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AL356390.1-201ENST00000455684 397 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AL590639.1-201ENST00000456484 337 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AC006511.1-201ENST00000470614 315 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 RN7SL466P-201ENST00000497546 295 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 MTATP6P22-201ENST00000507369 598 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AC104986.1-201ENST00000517978 436 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AC011853.1-201ENST00000518911 454 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AC022973.2-201ENST00000520146 549 ntTSL 4 BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AP001880.2-201ENST00000538233 448 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AC022968.1-201ENST00000567372 442 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 KLKP1-201ENST00000595979 403 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AL359198.2-201ENST00000611836 194 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AL096712.1-201ENST00000614561 159 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AL359742.1-201ENST00000622497 540 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AC145207.9-201ENST00000623802 325 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 AC084035.1-201ENST00000634543 607 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 ATE1-AS1-202ENST00000636460 506 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 LINC01739-205ENST00000641890 573 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 ZNF33CP-201ENST00000432492 2030 ntBASIC2.03□□□□□ -2.08
CHKB-CPT1BH3BT56 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
CHKB-CPT1BH3BT56 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms