Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 RPSAP7-201ENST00000456871 885 ntBASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 AP001992.1-205ENST00000462248 379 ntBASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 RN7SL308P-201ENST00000464971 297 ntBASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 LINC00881-201ENST00000467995 589 ntTSL 4 BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 MRPL42P6-201ENST00000486397 371 ntBASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 AC006487.2-201ENST00000503624 577 ntTSL 4 BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 AC092436.3-201ENST00000511788 257 ntBASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 RNU2-69P-201ENST00000516061 100 ntBASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 RNU6-911P-201ENST00000516523 104 ntBASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 RN7SKP96-201ENST00000516948 297 ntBASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 MYL6-211ENST00000548580 528 ntTSL 2 BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 AL359219.2-201ENST00000555184 348 ntBASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 HNRNPCP4-201ENST00000571636 900 ntBASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 AC091178.1-204ENST00000577328 366 ntTSL 4 BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 AC008521.1-201ENST00000587471 187 ntBASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 AC023813.4-201ENST00000607580 580 ntBASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 AL049794.2-201ENST00000616301 365 ntBASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 uc_338.9-201ENST00000617424 182 ntBASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 AC087893.2-201ENST00000623272 255 ntBASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 BROX-209ENST00000612948 4028 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 CR1-203ENST00000367051 7469 ntTSL 5 BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 CR1-204ENST00000367052 7469 ntTSL 5 BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 CR1-205ENST00000367053 7469 ntTSL 5 BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 FLJ42393-201ENST00000623801 2270 ntBASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC8.13□□□□□ -1.11
PCDHB13Q9Y5F0 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 AC097478.1-207ENST00000612706 2422 ntTSL 5 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 ADGRB3-201ENST00000238918 2927 ntTSL 2 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 RNU1-76P-201ENST00000362903 159 ntBASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 Y_RNA.151-201ENST00000363566 112 ntBASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 RPL24P7-201ENST00000399435 453 ntBASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 AL080315.1-201ENST00000406055 466 ntBASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 RNA5SP178-201ENST00000410380 128 ntBASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 RN7SKP51-201ENST00000410781 304 ntBASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 PPIAP30-201ENST00000415473 519 ntBASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 AL445928.1-201ENST00000435545 222 ntBASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 SNORA81.1-201ENST00000458922 177 ntBASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 SNORD97-201ENST00000459187 142 ntBASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 ATP5LP5-201ENST00000483050 299 ntBASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 RN7SL647P-201ENST00000485429 300 ntBASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 RBBP4P6-201ENST00000508098 202 ntBASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 AC008496.1-201ENST00000509131 295 ntBASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 IGLVIV-64-201ENST00000518581 301 ntBASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 AC126177.3-201ENST00000551839 688 ntBASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 AC009852.2-201ENST00000567898 485 ntBASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 AL138889.2-201ENST00000603883 242 ntBASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 AL359547.2-201ENST00000615810 418 ntBASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 DLEU1_1.1-201ENST00000618107 190 ntBASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 AC006019.2-201ENST00000451116 3044 ntTSL 2 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 NBPF26-206ENST00000617913 2931 ntTSL 5 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC8.12□□□□□ -1.11
PCDHB13Q9Y5F0 RBPJP6-201ENST00000411556 1431 ntBASIC8.12□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms