Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC4.74□□□□□ -1.65
PKP3Q9Y446 AC104978.1-201ENST00000449387 391 ntBASIC4.74□□□□□ -1.65
PKP3Q9Y446 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.74□□□□□ -1.65
PKP3Q9Y446 RNU6-1218P-201ENST00000458990 108 ntBASIC4.74□□□□□ -1.65
PKP3Q9Y446 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.74□□□□□ -1.65
PKP3Q9Y446 AC092324.1-201ENST00000468671 324 ntBASIC4.74□□□□□ -1.65
PKP3Q9Y446 RPS3AP22-201ENST00000488297 769 ntBASIC4.74□□□□□ -1.65
PKP3Q9Y446 DYNLL1P6-201ENST00000503440 264 ntBASIC4.74□□□□□ -1.65
PKP3Q9Y446 SCARNA22-201ENST00000503991 125 ntBASIC4.74□□□□□ -1.65
PKP3Q9Y446 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC4.74□□□□□ -1.65
PKP3Q9Y446 AC073358.1-201ENST00000505671 684 ntBASIC4.74□□□□□ -1.65
PKP3Q9Y446 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.74□□□□□ -1.65
PKP3Q9Y446 NDUFB4P12-201ENST00000513465 390 ntBASIC4.74□□□□□ -1.65
PKP3Q9Y446 MTND2P26-201ENST00000528255 1029 ntBASIC4.74□□□□□ -1.65
PKP3Q9Y446 OR5D15P-201ENST00000531671 942 ntBASIC4.74□□□□□ -1.65
PKP3Q9Y446 PDCL2P2-201ENST00000533651 189 ntBASIC4.74□□□□□ -1.65
PKP3Q9Y446 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PKP3Q9Y446 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.74□□□□□ -1.65
PKP3Q9Y446 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.74□□□□□ -1.65
PKP3Q9Y446 AC087465.1-201ENST00000560574 245 ntBASIC4.74□□□□□ -1.65
PKP3Q9Y446 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.74□□□□□ -1.65
PKP3Q9Y446 AC115085.1-201ENST00000588924 229 ntBASIC4.74□□□□□ -1.65
PKP3Q9Y446 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.74□□□□□ -1.65
PKP3Q9Y446 AL133507.1-201ENST00000605269 557 ntBASIC4.74□□□□□ -1.65
PKP3Q9Y446 AL391358.1-201ENST00000605342 190 ntBASIC4.74□□□□□ -1.65
PKP3Q9Y446 MIR8069-1-201ENST00000616627 86 ntBASIC4.74□□□□□ -1.65
PKP3Q9Y446 MIR8069-2-201ENST00000621412 86 ntBASIC4.74□□□□□ -1.65
PKP3Q9Y446 AC015804.1-201ENST00000622935 435 ntBASIC4.74□□□□□ -1.65
PKP3Q9Y446 AC007490.1-201ENST00000624321 703 ntBASIC4.74□□□□□ -1.65
PKP3Q9Y446 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC4.74□□□□□ -1.65
PKP3Q9Y446 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.74□□□□□ -1.65
PKP3Q9Y446 AC092079.1-201ENST00000558620 1985 ntBASIC4.74□□□□□ -1.65
PKP3Q9Y446 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PKP3Q9Y446 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
PKP3Q9Y446 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
PKP3Q9Y446 AC009313.2-201ENST00000417893 1941 ntBASIC4.74□□□□□ -1.65
PKP3Q9Y446 DHX9P1-201ENST00000436565 3076 ntBASIC4.74□□□□□ -1.65
PKP3Q9Y446 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.73□□□□□ -1.65
PKP3Q9Y446 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PKP3Q9Y446 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
PKP3Q9Y446 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PKP3Q9Y446 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
PKP3Q9Y446 RN7SKP115-201ENST00000363177 317 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 Y_RNA.169-201ENST00000363745 96 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 Y_RNA.192-201ENST00000363977 102 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 RNU6-560P-201ENST00000364007 108 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 SNORA58B-201ENST00000364259 136 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
PKP3Q9Y446 AL590762.2-201ENST00000395798 571 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.73□□□□□ -1.65
PKP3Q9Y446 TMSB4XP8-201ENST00000402089 135 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 AL133270.1-201ENST00000402635 279 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 AL080315.1-201ENST00000406055 466 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 RN7SKP100-201ENST00000411258 284 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.73□□□□□ -1.65
PKP3Q9Y446 TMSB4XP6-201ENST00000415187 135 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.73□□□□□ -1.65
PKP3Q9Y446 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC4.73□□□□□ -1.65
PKP3Q9Y446 AL645608.4-201ENST00000423619 154 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 TMSB4XP1-201ENST00000424567 135 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 AL590762.4-201ENST00000425885 253 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 MTCO1P54-201ENST00000430139 712 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.73□□□□□ -1.65
PKP3Q9Y446 AC016831.4-201ENST00000438302 307 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 USP9YP22-201ENST00000438971 294 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 RPL23AP76-201ENST00000441860 458 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 AC243772.1-201ENST00000451620 410 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 ART2BP-201ENST00000453501 499 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 AC079168.2-201ENST00000453977 416 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
PKP3Q9Y446 RPL37P3-201ENST00000456825 293 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC4.73□□□□□ -1.65
PKP3Q9Y446 CYCSP34-201ENST00000458172 304 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.73□□□□□ -1.65
PKP3Q9Y446 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.73□□□□□ -1.65
PKP3Q9Y446 AC083982.1-201ENST00000485679 344 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 AC025164.1-201ENST00000496249 478 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.73□□□□□ -1.65
PKP3Q9Y446 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC4.73□□□□□ -1.65
PKP3Q9Y446 AC105313.1-201ENST00000509121 353 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.73□□□□□ -1.65
PKP3Q9Y446 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.73□□□□□ -1.65
PKP3Q9Y446 AP003461.1-201ENST00000528866 78 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.73□□□□□ -1.65
PKP3Q9Y446 AC107918.3-201ENST00000533272 382 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.73□□□□□ -1.65
PKP3Q9Y446 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.73□□□□□ -1.65
PKP3Q9Y446 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.73□□□□□ -1.65
PKP3Q9Y446 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC4.73□□□□□ -1.65
PKP3Q9Y446 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.73□□□□□ -1.65
PKP3Q9Y446 UBE2FP2-201ENST00000566646 462 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC4.73□□□□□ -1.65
PKP3Q9Y446 AC091042.1-201ENST00000579213 173 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.73□□□□□ -1.65
PKP3Q9Y446 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.73□□□□□ -1.65
PKP3Q9Y446 AC080013.3-201ENST00000606839 578 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC4.73□□□□□ -1.65
PKP3Q9Y446 AL049539.1-201ENST00000611964 459 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 AC243654.2-201ENST00000612843 443 ntBASIC4.73□□□□□ -1.65
PKP3Q9Y446 AC116563.2-201ENST00000624751 535 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms