Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
PDZRN3Q9UPQ7 AC079753.1-201ENST00000623243 3868 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 CYP1D1P-201ENST00000416662 1433 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 ZNF658B-201ENST00000602828 3408 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 Y_RNA.135-201ENST00000363439 95 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 RNA5SP156-201ENST00000410250 110 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 SEPT7P8-201ENST00000413308 775 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AC015977.1-201ENST00000418887 292 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AC245884.2-201ENST00000426257 404 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 MTCO1P3-201ENST00000429327 192 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 PCMTD1P1-201ENST00000455560 355 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AC112187.1-201ENST00000455837 479 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AC007182.2-201ENST00000489251 402 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AL035690.1-201ENST00000490892 383 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 RNU6-1143P-201ENST00000516125 104 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AC055876.1-202ENST00000567053 138 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AC020914.6-201ENST00000594327 272 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AC073539.2-201ENST00000597113 165 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AC098479.1-201ENST00000609225 154 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 Xist_exon4.1-201ENST00000615964 126 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AC068722.2-201ENST00000618734 544 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AL731566.2-201ENST00000618971 317 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AC079597.1-201ENST00000624306 508 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AC138649.5-201ENST00000637456 137 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AC116667.2-201ENST00000641075 823 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AC079776.5-201ENST00000641920 211 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 TTC3-201ENST00000354749 9084 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 AL359976.1-201ENST00000418655 3528 ntBASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 PCDH15-213ENST00000395445 5917 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
PDZRN3Q9UPQ7 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 CR1-203ENST00000367051 7469 ntTSL 5 BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 ZNF101P1-201ENST00000435701 1720 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 Y_RNA.148-201ENST00000363557 117 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 RNU6-1297P-201ENST00000384415 104 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 RPL35AP31-201ENST00000418340 337 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 VDAC1P6-201ENST00000430062 855 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 IFNA20P-201ENST00000436840 528 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 SEPT14P3-201ENST00000439401 183 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AC064862.4-201ENST00000442180 334 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AL732372.2-207ENST00000445840 183 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 SEPT14P2-201ENST00000453405 183 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 RNU7-152P-201ENST00000458982 64 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 RPS26P39-201ENST00000469206 341 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AL355032.1-201ENST00000472981 438 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 AC006539.1-201ENST00000481419 501 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 ACTG1P13-201ENST00000486987 1043 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 RNA5SP400-201ENST00000517155 111 ntBASIC7.78□□□□□ -1.16
PDZRN3Q9UPQ7 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms