Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RIMBP3Q9UFD9 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.79□□□□□ -1.48
RIMBP3Q9UFD9 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
RIMBP3Q9UFD9 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.79□□□□□ -1.48
RIMBP3Q9UFD9 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RIMBP3Q9UFD9 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC5.79□□□□□ -1.48
RIMBP3Q9UFD9 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RIMBP3Q9UFD9 MIR422A-201ENST00000362286 90 ntBASIC5.79□□□□□ -1.48
RIMBP3Q9UFD9 PRELID3BP10-201ENST00000431957 584 ntBASIC5.79□□□□□ -1.48
RIMBP3Q9UFD9 RPL21P112-201ENST00000434403 463 ntBASIC5.79□□□□□ -1.48
RIMBP3Q9UFD9 AL513124.1-201ENST00000450410 614 ntBASIC5.79□□□□□ -1.48
RIMBP3Q9UFD9 RN7SL432P-201ENST00000484057 298 ntBASIC5.79□□□□□ -1.48
RIMBP3Q9UFD9 NPM1P28-201ENST00000492269 840 ntBASIC5.79□□□□□ -1.48
RIMBP3Q9UFD9 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC5.79□□□□□ -1.48
RIMBP3Q9UFD9 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
RIMBP3Q9UFD9 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RIMBP3Q9UFD9 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RIMBP3Q9UFD9 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
RIMBP3Q9UFD9 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
RIMBP3Q9UFD9 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
RIMBP3Q9UFD9 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
RIMBP3Q9UFD9 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
RIMBP3Q9UFD9 SNORD96B-201ENST00000386148 79 ntBASIC5.78□□□□□ -1.48
RIMBP3Q9UFD9 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.78□□□□□ -1.48
RIMBP3Q9UFD9 NPM1P13-201ENST00000452663 865 ntBASIC5.78□□□□□ -1.48
RIMBP3Q9UFD9 VN1R104P-201ENST00000505115 1009 ntBASIC5.78□□□□□ -1.48
RIMBP3Q9UFD9 AP001207.2-201ENST00000519490 539 ntBASIC5.78□□□□□ -1.48
RIMBP3Q9UFD9 AC007599.1-201ENST00000568688 1174 ntBASIC5.78□□□□□ -1.48
RIMBP3Q9UFD9 AL163642.2-201ENST00000604722 1019 ntBASIC5.78□□□□□ -1.48
RIMBP3Q9UFD9 HNRNPDLP4-201ENST00000605144 301 ntBASIC5.78□□□□□ -1.48
RIMBP3Q9UFD9 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.78□□□□□ -1.48
RIMBP3Q9UFD9 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.78□□□□□ -1.48
RIMBP3Q9UFD9 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
RIMBP3Q9UFD9 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
RIMBP3Q9UFD9 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RIMBP3Q9UFD9 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
RIMBP3Q9UFD9 AC009313.2-201ENST00000417893 1941 ntBASIC5.78□□□□□ -1.48
RIMBP3Q9UFD9 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
RIMBP3Q9UFD9 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.78□□□□□ -1.48
RIMBP3Q9UFD9 AL672167.1-203ENST00000641299 2975 ntBASIC5.78□□□□□ -1.48
RIMBP3Q9UFD9 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
RIMBP3Q9UFD9 AC010095.1-201ENST00000443543 144 ntBASIC5.77□□□□□ -1.48
RIMBP3Q9UFD9 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC5.77□□□□□ -1.48
RIMBP3Q9UFD9 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC5.77□□□□□ -1.48
RIMBP3Q9UFD9 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC5.77□□□□□ -1.48
RIMBP3Q9UFD9 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC5.77□□□□□ -1.48
RIMBP3Q9UFD9 AC091826.1-201ENST00000514065 313 ntBASIC5.77□□□□□ -1.48
RIMBP3Q9UFD9 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC5.77□□□□□ -1.48
RIMBP3Q9UFD9 AC103783.1-201ENST00000520506 373 ntBASIC5.77□□□□□ -1.48
RIMBP3Q9UFD9 AC004024.1-201ENST00000549244 247 ntBASIC5.77□□□□□ -1.48
RIMBP3Q9UFD9 AC069209.1-201ENST00000619282 651 ntBASIC5.77□□□□□ -1.48
RIMBP3Q9UFD9 AC005086.4-201ENST00000623065 213 ntBASIC5.77□□□□□ -1.48
RIMBP3Q9UFD9 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC5.77□□□□□ -1.48
RIMBP3Q9UFD9 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.77□□□□□ -1.48
RIMBP3Q9UFD9 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
RIMBP3Q9UFD9 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
RIMBP3Q9UFD9 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RIMBP3Q9UFD9 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.77□□□□□ -1.49
RIMBP3Q9UFD9 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.77□□□□□ -1.49
RIMBP3Q9UFD9 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.77□□□□□ -1.49
RIMBP3Q9UFD9 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.77□□□□□ -1.49
RIMBP3Q9UFD9 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.77□□□□□ -1.49
RIMBP3Q9UFD9 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC5.77□□□□□ -1.49
RIMBP3Q9UFD9 AC008802.1-201ENST00000519121 791 ntBASIC5.77□□□□□ -1.49
RIMBP3Q9UFD9 IGHVIII-44-202ENST00000636235 289 ntBASIC5.77□□□□□ -1.49
RIMBP3Q9UFD9 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
RIMBP3Q9UFD9 THAP12P5-201ENST00000405864 2275 ntBASIC5.76□□□□□ -1.49
RIMBP3Q9UFD9 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
RIMBP3Q9UFD9 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RIMBP3Q9UFD9 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
RIMBP3Q9UFD9 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RIMBP3Q9UFD9 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.76□□□□□ -1.49
RIMBP3Q9UFD9 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.76□□□□□ -1.49
RIMBP3Q9UFD9 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC5.76□□□□□ -1.49
RIMBP3Q9UFD9 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RIMBP3Q9UFD9 AC239809.1-201ENST00000450470 217 ntBASIC5.76□□□□□ -1.49
RIMBP3Q9UFD9 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC5.76□□□□□ -1.49
RIMBP3Q9UFD9 AP002884.2-201ENST00000471647 395 ntBASIC5.76□□□□□ -1.49
RIMBP3Q9UFD9 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC5.76□□□□□ -1.49
RIMBP3Q9UFD9 AL390816.3-201ENST00000604527 1066 ntBASIC5.76□□□□□ -1.49
RIMBP3Q9UFD9 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
RIMBP3Q9UFD9 AC000374.1-201ENST00000434698 1745 ntBASIC5.76□□□□□ -1.49
RIMBP3Q9UFD9 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.76□□□□□ -1.49
RIMBP3Q9UFD9 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
RIMBP3Q9UFD9 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
RIMBP3Q9UFD9 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC5.76□□□□□ -1.49
RIMBP3Q9UFD9 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC5.76□□□□□ -1.49
RIMBP3Q9UFD9 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC5.75□□□□□ -1.49
RIMBP3Q9UFD9 NPM1P11-201ENST00000417106 855 ntBASIC5.75□□□□□ -1.49
RIMBP3Q9UFD9 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.75□□□□□ -1.49
RIMBP3Q9UFD9 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.75□□□□□ -1.49
RIMBP3Q9UFD9 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RIMBP3Q9UFD9 AC022080.3-201ENST00000544433 482 ntBASIC5.75□□□□□ -1.49
RIMBP3Q9UFD9 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC5.75□□□□□ -1.49
RIMBP3Q9UFD9 AC015922.4-201ENST00000612568 690 ntBASIC5.75□□□□□ -1.49
RIMBP3Q9UFD9 AL137790.1-201ENST00000634283 177 ntBASIC5.75□□□□□ -1.49
RIMBP3Q9UFD9 AL121839.2-201ENST00000565058 6943 ntBASIC5.75□□□□□ -1.49
RIMBP3Q9UFD9 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RIMBP3Q9UFD9 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
RIMBP3Q9UFD9 AC004656.1-201ENST00000568479 4951 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms