Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PHRF1Q9P1Y6 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.89□□□□□ -1.63
PHRF1Q9P1Y6 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PHRF1Q9P1Y6 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
PHRF1Q9P1Y6 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.88□□□□□ -1.63
PHRF1Q9P1Y6 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC4.88□□□□□ -1.63
PHRF1Q9P1Y6 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
PHRF1Q9P1Y6 AL691447.1-201ENST00000419456 387 ntBASIC4.88□□□□□ -1.63
PHRF1Q9P1Y6 SDCBPP2-201ENST00000424643 885 ntBASIC4.88□□□□□ -1.63
PHRF1Q9P1Y6 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.88□□□□□ -1.63
PHRF1Q9P1Y6 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.88□□□□□ -1.63
PHRF1Q9P1Y6 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC4.88□□□□□ -1.63
PHRF1Q9P1Y6 AC125494.3-201ENST00000602759 455 ntBASIC4.88□□□□□ -1.63
PHRF1Q9P1Y6 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.88□□□□□ -1.63
PHRF1Q9P1Y6 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.88□□□□□ -1.63
PHRF1Q9P1Y6 AC083843.3-201ENST00000623679 2186 ntBASIC4.88□□□□□ -1.63
PHRF1Q9P1Y6 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.88□□□□□ -1.63
PHRF1Q9P1Y6 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.88□□□□□ -1.63
PHRF1Q9P1Y6 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PHRF1Q9P1Y6 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
PHRF1Q9P1Y6 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
PHRF1Q9P1Y6 AC008481.1-201ENST00000463278 396 ntBASIC4.87□□□□□ -1.63
PHRF1Q9P1Y6 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PHRF1Q9P1Y6 PHBP14-201ENST00000512887 367 ntBASIC4.87□□□□□ -1.63
PHRF1Q9P1Y6 MIR7112-201ENST00000616126 65 ntBASIC4.87□□□□□ -1.63
PHRF1Q9P1Y6 OR5AC4P-202ENST00000642086 985 ntBASIC4.87□□□□□ -1.63
PHRF1Q9P1Y6 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PHRF1Q9P1Y6 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PHRF1Q9P1Y6 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
PHRF1Q9P1Y6 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PHRF1Q9P1Y6 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PHRF1Q9P1Y6 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
PHRF1Q9P1Y6 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC4.87□□□□□ -1.63
PHRF1Q9P1Y6 AL442128.2-201ENST00000620246 1824 ntBASIC4.87□□□□□ -1.63
PHRF1Q9P1Y6 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.87□□□□□ -1.63
PHRF1Q9P1Y6 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
PHRF1Q9P1Y6 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
PHRF1Q9P1Y6 GNG5P1-201ENST00000255500 204 ntBASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 SNORA48.5-201ENST00000391143 135 ntBASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 AL031121.1-201ENST00000406553 254 ntBASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 RN7SKP111-201ENST00000410349 271 ntBASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 MTCO1P45-201ENST00000431457 267 ntBASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 RPS15AP29-201ENST00000445539 400 ntBASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 AC073587.1-201ENST00000447093 876 ntBASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 AC008638.3-201ENST00000603341 463 ntBASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 AC069209.1-201ENST00000619282 651 ntBASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 AC011266.1-201ENST00000624119 3569 ntBASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 AC093535.2-201ENST00000624769 2326 ntBASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 RNA5SP52-201ENST00000362448 134 ntBASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 RNA5SP374-201ENST00000362939 125 ntBASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 BMS1P3-201ENST00000372011 932 ntBASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 STMN1P2-201ENST00000508435 439 ntBASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 AC068790.5-201ENST00000602741 355 ntBASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
PHRF1Q9P1Y6 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PHRF1Q9P1Y6 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PHRF1Q9P1Y6 BDP1P-201ENST00000582658 1990 ntBASIC4.85□□□□□ -1.63
PHRF1Q9P1Y6 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PHRF1Q9P1Y6 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
PHRF1Q9P1Y6 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.85□□□□□ -1.63
PHRF1Q9P1Y6 MTCO1P46-201ENST00000451639 1491 ntBASIC4.85□□□□□ -1.63
PHRF1Q9P1Y6 RNA5SP197-201ENST00000363357 119 ntBASIC4.85□□□□□ -1.63
PHRF1Q9P1Y6 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.85□□□□□ -1.63
PHRF1Q9P1Y6 OR5AW1P-201ENST00000426334 1006 ntBASIC4.85□□□□□ -1.63
PHRF1Q9P1Y6 ATP5HP2-201ENST00000433885 485 ntBASIC4.85□□□□□ -1.63
PHRF1Q9P1Y6 AC069285.2-201ENST00000440210 275 ntBASIC4.85□□□□□ -1.63
PHRF1Q9P1Y6 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.85□□□□□ -1.63
PHRF1Q9P1Y6 UBA52P3-201ENST00000491303 382 ntBASIC4.85□□□□□ -1.63
PHRF1Q9P1Y6 PRELID3BP6-201ENST00000503839 571 ntBASIC4.85□□□□□ -1.63
PHRF1Q9P1Y6 AC097462.2-201ENST00000504623 481 ntBASIC4.85□□□□□ -1.63
PHRF1Q9P1Y6 FTH1P9-201ENST00000513251 355 ntBASIC4.85□□□□□ -1.63
PHRF1Q9P1Y6 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.85□□□□□ -1.63
PHRF1Q9P1Y6 EIF4BP1-201ENST00000554881 351 ntBASIC4.85□□□□□ -1.63
PHRF1Q9P1Y6 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms