Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC011453.2-201ENST00000603737 729 ntBASIC4.66□□□□□ -1.66
POLR1BQ9H9Y6 AP004247.3-201ENST00000608682 624 ntBASIC4.66□□□□□ -1.66
POLR1BQ9H9Y6 AC007497.1-201ENST00000610421 561 ntBASIC4.66□□□□□ -1.66
POLR1BQ9H9Y6 FAM27B-201ENST00000610601 213 ntBASIC4.66□□□□□ -1.66
POLR1BQ9H9Y6 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
POLR1BQ9H9Y6 AC123767.1-202ENST00000620407 817 ntBASIC4.66□□□□□ -1.66
POLR1BQ9H9Y6 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC4.66□□□□□ -1.66
POLR1BQ9H9Y6 OR1S1-201ENST00000624470 978 ntBASIC4.66□□□□□ -1.66
POLR1BQ9H9Y6 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.66□□□□□ -1.66
POLR1BQ9H9Y6 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.66□□□□□ -1.66
POLR1BQ9H9Y6 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
POLR1BQ9H9Y6 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
POLR1BQ9H9Y6 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.66□□□□□ -1.66
POLR1BQ9H9Y6 AC114546.3-201ENST00000623582 1734 ntBASIC4.66□□□□□ -1.66
POLR1BQ9H9Y6 LINC01109-201ENST00000603837 3081 ntBASIC4.66□□□□□ -1.66
POLR1BQ9H9Y6 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
POLR1BQ9H9Y6 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.66□□□□□ -1.66
POLR1BQ9H9Y6 ASNSP1-201ENST00000518311 1939 ntBASIC4.66□□□□□ -1.66
POLR1BQ9H9Y6 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
POLR1BQ9H9Y6 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
POLR1BQ9H9Y6 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
POLR1BQ9H9Y6 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
POLR1BQ9H9Y6 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
POLR1BQ9H9Y6 AC010300.1-201ENST00000600671 5134 ntBASIC4.65□□□□□ -1.66
POLR1BQ9H9Y6 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
POLR1BQ9H9Y6 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
POLR1BQ9H9Y6 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
POLR1BQ9H9Y6 FAM3C2-201ENST00000312214 681 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 SNORD113.2-201ENST00000364166 89 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 AC019155.1-201ENST00000382242 574 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 TMSB4XP8-201ENST00000402089 135 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 ELOCP19-201ENST00000411919 318 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 OR51A3P-201ENST00000413596 924 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 TMSB4XP6-201ENST00000415187 135 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 TMSB4XP1-201ENST00000424567 135 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 AC004975.1-201ENST00000428733 208 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 NMNAT1P2-201ENST00000435192 860 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 RPS26P2-201ENST00000440331 348 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 ARL4AP3-201ENST00000441452 574 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 AC005008.1-201ENST00000456151 612 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 UBA52P3-201ENST00000491303 382 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 RN7SL441P-201ENST00000492388 296 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 SCARNA22-201ENST00000503991 125 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 AC093840.1-201ENST00000511599 336 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 MTCO3P15-201ENST00000526563 574 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 OR5M2P-201ENST00000529003 936 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 MTCYBP23-201ENST00000558717 1102 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 NIFKP8-201ENST00000560500 874 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 AC090312.1-201ENST00000580637 348 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 AC090948.2-201ENST00000607363 564 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 AC243756.2-201ENST00000618406 463 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 AL109659.3-201ENST00000624985 950 ntBASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
POLR1BQ9H9Y6 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
POLR1BQ9H9Y6 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.64□□□□□ -1.67
POLR1BQ9H9Y6 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
POLR1BQ9H9Y6 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.64□□□□□ -1.67
POLR1BQ9H9Y6 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
POLR1BQ9H9Y6 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
POLR1BQ9H9Y6 DDX18P3-201ENST00000404856 2007 ntBASIC4.64□□□□□ -1.67
POLR1BQ9H9Y6 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
POLR1BQ9H9Y6 RNA5SP479-201ENST00000364858 117 ntBASIC4.64□□□□□ -1.67
POLR1BQ9H9Y6 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
POLR1BQ9H9Y6 RNU6-224P-201ENST00000384055 107 ntBASIC4.64□□□□□ -1.67
POLR1BQ9H9Y6 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
POLR1BQ9H9Y6 RN7SKP27-201ENST00000410684 333 ntBASIC4.64□□□□□ -1.67
POLR1BQ9H9Y6 RNA5SP146-201ENST00000410743 123 ntBASIC4.64□□□□□ -1.67
POLR1BQ9H9Y6 AL592293.2-201ENST00000422292 996 ntBASIC4.64□□□□□ -1.67
POLR1BQ9H9Y6 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.64□□□□□ -1.67
POLR1BQ9H9Y6 AC234779.1-201ENST00000425910 285 ntBASIC4.64□□□□□ -1.67
POLR1BQ9H9Y6 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC4.64□□□□□ -1.67
POLR1BQ9H9Y6 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC4.64□□□□□ -1.67
POLR1BQ9H9Y6 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC4.64□□□□□ -1.67
POLR1BQ9H9Y6 NAP1L1P3-201ENST00000462291 880 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms