Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 AL133412.1-201ENST00000380194 2992 ntBASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 AC012020.1-201ENST00000624541 1728 ntBASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCSER1Q9C0I3 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 AL121657.1-201ENST00000327215 531 ntBASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 RNU6-452P-201ENST00000384406 107 ntBASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 OR8G2P-201ENST00000412796 908 ntBASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 RPL21P133-201ENST00000443666 476 ntBASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 GAS5-223ENST00000452197 483 ntTSL 3 BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 RPS26P15-201ENST00000488067 348 ntBASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 MIR4512-201ENST00000583257 77 ntBASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 AC055764.2-201ENST00000610089 670 ntBASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 AC067852.7-201ENST00000623270 535 ntBASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 AC090506.2-201ENST00000624521 419 ntBASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 AC116563.2-201ENST00000624751 535 ntBASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 CFTRP2-201ENST00000634304 199 ntBASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 DDX6P1-205ENST00000441966 1436 ntBASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.53□□□□□ -1.68
CCSER1Q9C0I3 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 RNU6-1279P-201ENST00000383917 103 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 AL022722.2-201ENST00000402519 180 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 Z86062.1-201ENST00000406773 777 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 RNA5SP317-201ENST00000410176 116 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 RNA5SP311-201ENST00000411290 116 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 AC004552.1-201ENST00000419089 348 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 AC115285.1-201ENST00000424879 736 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 NANOGP6-201ENST00000429190 847 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 MTND4LP14-201ENST00000429447 288 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 RPS27AP12-201ENST00000429552 465 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 CBX1P4-201ENST00000439415 457 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 AC114755.5-201ENST00000447760 831 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 NDUFS5P3-201ENST00000450668 321 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 RPS26P3-201ENST00000470205 348 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 AC006511.1-201ENST00000470614 315 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 AC090543.2-201ENST00000483963 348 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 AC004057.1-201ENST00000485827 348 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 AC107398.1-201ENST00000486904 505 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 RNA5SP315-201ENST00000516340 116 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 SNORA26.10-201ENST00000516427 141 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 RNA5SP312-201ENST00000517068 116 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 NAV2-AS1-201ENST00000526642 660 ntTSL 3 BASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 DEFB109D-201ENST00000529497 240 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 GNRHR2P1-201ENST00000555315 631 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 MIR3160-1-201ENST00000577972 85 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 AC015849.2-201ENST00000605738 409 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 AC128687.2-201ENST00000609657 566 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 AP000255.1-201ENST00000610276 676 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 AC016588.2-201ENST00000632484 3021 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 Z73965.1-201ENST00000623412 2297 ntBASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CCSER1Q9C0I3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CCSER1Q9C0I3 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms