Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.66□□□□□ -1.34
TRAIPQ9BWF2 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AL592437.2-201ENST00000421655 2434 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 RNU105B-201ENST00000364478 208 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 RN7SKP226-201ENST00000364912 300 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AL096829.1-201ENST00000413677 457 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 RPL35AP3-201ENST00000414680 288 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AL136231.1-201ENST00000429407 730 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 CBX1P1-201ENST00000440184 427 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 H3F3BP1-201ENST00000440551 403 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AC114495.1-201ENST00000441274 436 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AL359955.2-201ENST00000445380 353 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 GAPDHP14-201ENST00000450472 937 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 ST13P14-201ENST00000474095 734 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AC006499.3-201ENST00000506077 748 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AC011352.1-201ENST00000512300 793 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 RN7SKP244-201ENST00000516513 307 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 RN7SKP116-201ENST00000516902 319 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 IGKV2D-36-201ENST00000518643 226 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AC022616.6-201ENST00000520479 119 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 OR8L1P-201ENST00000534005 955 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 OR5AN2P-201ENST00000534535 896 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AL390334.1-201ENST00000556395 450 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 HNRNPCP4-201ENST00000571636 900 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AL109618.2-201ENST00000605527 211 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AL161734.1-201ENST00000609720 557 ntBASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TRAIPQ9BWF2 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
TRAIPQ9BWF2 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.65□□□□□ -1.35
TRAIPQ9BWF2 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
TRAIPQ9BWF2 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
TRAIPQ9BWF2 SHQ1P1-201ENST00000437111 1544 ntBASIC6.65□□□□□ -1.35
TRAIPQ9BWF2 AC017104.4-201ENST00000636283 1592 ntBASIC6.65□□□□□ -1.35
TRAIPQ9BWF2 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.65□□□□□ -1.35
TRAIPQ9BWF2 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
TRAIPQ9BWF2 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.65□□□□□ -1.35
TRAIPQ9BWF2 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
TRAIPQ9BWF2 AL672167.1-205ENST00000641112 3080 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 USP45-204ENST00000369233 2514 ntTSL 5 BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 RN7SKP78-201ENST00000364711 318 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 RNU6-339P-201ENST00000384310 107 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 RNA5SP284-201ENST00000384547 118 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 U3.20-201ENST00000390909 217 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 RPL7P25-201ENST00000404151 721 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 MIR1203-201ENST00000408812 85 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 RN7SKP235-201ENST00000410662 305 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 AC073626.1-201ENST00000415146 582 ntTSL 4 BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 BX295541.1-201ENST00000417774 250 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 RPL36AP36-201ENST00000418616 301 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 AL035660.1-201ENST00000422041 222 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 ISCA1P6-201ENST00000427740 390 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 AC112653.1-201ENST00000443851 386 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 AL022237.1-201ENST00000446663 358 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 OFD1P4Y-201ENST00000455273 1179 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 SETP20-201ENST00000457046 852 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 AC021382.1-201ENST00000483523 359 ntBASIC6.64□□□□□ -1.35
TRAIPQ9BWF2 RPL9P6-201ENST00000492764 598 ntBASIC6.64□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms