Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 RNU6-452P-201ENST00000384406 107 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 RNU6-1005P-201ENST00000384519 107 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 MIR323B-201ENST00000385269 82 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AL603766.1-201ENST00000407763 664 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 MIR1251-201ENST00000408552 70 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 RNU2-17P-201ENST00000410290 190 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 RNU4-25P-201ENST00000410569 230 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 MTCO3P4-201ENST00000419236 787 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AC023128.2-201ENST00000420880 1223 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AL158073.1-201ENST00000426848 1104 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 USP12PY-201ENST00000427677 1064 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 BTF3P10-201ENST00000433415 495 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 KCTD9P3-201ENST00000434597 1169 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 MTCYBP21-201ENST00000443300 1113 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AC009963.2-201ENST00000453431 138 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 Z95152.1-201ENST00000453556 656 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AC011276.1-201ENST00000469688 323 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 RPL7P24-201ENST00000493052 752 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 BTF3L4P4-201ENST00000506381 449 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AC008628.1-201ENST00000508663 265 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 VTA1P2-201ENST00000520205 911 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AC107016.1-201ENST00000550463 337 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AC022884.3-201ENST00000579571 248 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 MIR548Y-201ENST00000582739 110 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AL139286.1-201ENST00000604465 483 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AC055764.2-201ENST00000610089 670 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AC026368.1-201ENST00000614934 690 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 FAM35DP-201ENST00000323387 2712 ntBASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HDHD3Q9BSH5 AC006042.3-201ENST00000454684 1469 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 RNU4-31P-201ENST00000384211 141 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 U3.22-201ENST00000391120 215 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 RNU11-4P-201ENST00000391149 133 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 HSPD1P16-201ENST00000402302 394 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 RNU4-27P-201ENST00000410889 139 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 ELOCP19-201ENST00000411919 318 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 HSPE1P12-201ENST00000412576 301 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AC013404.1-201ENST00000413068 249 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AL158050.1-201ENST00000416077 457 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 RAC1P3-201ENST00000416129 580 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 OR5BE1P-201ENST00000425977 939 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AL035458.1-201ENST00000433096 585 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AL772161.1-201ENST00000439130 476 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AC069540.1-201ENST00000446320 988 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 NDUFA12P1-201ENST00000455914 406 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AL049829.1-201ENST00000465411 156 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AC078857.1-201ENST00000469870 667 ntBASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
HDHD3Q9BSH5 RN7SL604P-201ENST00000492589 296 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms