Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
PHOX2BQ99453 USP45-204ENST00000369233 2514 ntTSL 5 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PHOX2BQ99453 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PHOX2BQ99453 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PHOX2BQ99453 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 AC087430.1-201ENST00000451707 3699 ntTSL 2 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 AC241584.2-201ENST00000637142 2090 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
PHOX2BQ99453 RNU6-238P-201ENST00000363313 106 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 RN7SKP189-201ENST00000365042 330 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 SNORA75.6-201ENST00000391318 127 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 AL590143.1-201ENST00000405071 138 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PHOX2BQ99453 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 RAC1P6-201ENST00000423911 575 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 AC239367.3-201ENST00000428996 814 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 GAPDHP48-201ENST00000436626 961 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 ATP6V1E1P1-201ENST00000439215 681 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 AC019185.1-201ENST00000442718 389 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 FUNDC2P2-202ENST00000443452 493 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 GAPDHP23-201ENST00000444823 993 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 AL162388.1-201ENST00000450912 352 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 NDUFB2-215ENST00000482954 544 ntTSL 3 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 AC016559.2-201ENST00000510759 359 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 AC107222.1-201ENST00000510899 637 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 AC105031.1-201ENST00000518550 476 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 IGHV3-57-201ENST00000520143 280 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 AC022360.1-201ENST00000521058 340 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 MIR4504-201ENST00000577413 92 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 AL683813.2-201ENST00000605245 502 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PHOX2BQ99453 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PHOX2BQ99453 PAH-201ENST00000307000 2466 ntTSL 5 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 NAA15-208ENST00000515576 2456 ntTSL 2 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PHOX2BQ99453 C3orf30-201ENST00000295622 1814 ntAPPRIS P2 TSL 1 (best) BASIC7.12□□□□□ -1.27
PHOX2BQ99453 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
PHOX2BQ99453 AC107980.1-201ENST00000558671 3355 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 ADGRL3-209ENST00000508693 5009 ntTSL 5 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 AP002800.1-201ENST00000624982 2225 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PHOX2BQ99453 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 TPTE2P4-201ENST00000258589 1605 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 AC005592.1-201ENST00000566527 1640 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
PHOX2BQ99453 AC104083.1-201ENST00000569449 2615 ntBASIC7.12□□□□□ -1.27
PHOX2BQ99453 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 AC091304.1-202ENST00000568624 3100 ntTSL 5 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 AC006305.1-201ENST00000382897 2558 ntTSL 2 BASIC7.12□□□□□ -1.27
PHOX2BQ99453 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PHOX2BQ99453 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PHOX2BQ99453 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PHOX2BQ99453 ANKRD30A-205ENST00000611781 4474 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 NFAT5-201ENST00000349945 13362 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PHOX2BQ99453 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PHOX2BQ99453 KIF15-201ENST00000326047 4842 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PHOX2BQ99453 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PHOX2BQ99453 AC103710.2-202ENST00000641454 2853 ntBASIC7.11□□□□□ -1.27
PHOX2BQ99453 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
PHOX2BQ99453 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PHOX2BQ99453 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
PHOX2BQ99453 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 AC235565.1-201ENST00000456962 1325 ntBASIC7.11□□□□□ -1.27
PHOX2BQ99453 AC006116.1-201ENST00000587908 2171 ntBASIC7.11□□□□□ -1.27
PHOX2BQ99453 RNU6-562P-201ENST00000362731 107 ntBASIC7.11□□□□□ -1.27
PHOX2BQ99453 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 Y_RNA.428-201ENST00000384078 102 ntBASIC7.11□□□□□ -1.27
PHOX2BQ99453 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 Y_RNA.625-201ENST00000411256 107 ntBASIC7.11□□□□□ -1.27
PHOX2BQ99453 TEX38-202ENST00000415500 566 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
PHOX2BQ99453 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 RPL7AP71-201ENST00000451120 739 ntBASIC7.11□□□□□ -1.27
PHOX2BQ99453 AC104073.1-201ENST00000451988 151 ntBASIC7.11□□□□□ -1.27
PHOX2BQ99453 AKR1D1P1-201ENST00000457236 936 ntBASIC7.11□□□□□ -1.27
PHOX2BQ99453 AC011225.1-201ENST00000457751 369 ntBASIC7.11□□□□□ -1.27
PHOX2BQ99453 SNORD121B-201ENST00000458838 81 ntBASIC7.11□□□□□ -1.27
PHOX2BQ99453 RNU6-1218P-201ENST00000458990 108 ntBASIC7.11□□□□□ -1.27
PHOX2BQ99453 RPL23AP64-201ENST00000469465 435 ntBASIC7.11□□□□□ -1.27
PHOX2BQ99453 PPP4R2-207ENST00000495566 559 ntTSL 3 BASIC7.11□□□□□ -1.27
PHOX2BQ99453 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms