Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 LYPLA1P1-201ENST00000434514 622 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 RPL36AP33-201ENST00000450395 310 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 OR6C5P-201ENST00000452388 923 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 RPL21P134-201ENST00000453468 483 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 RNU7-140P-201ENST00000459546 60 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 RN7SL189P-201ENST00000468631 289 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 AC069439.1-201ENST00000494739 167 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 ARL4AP2-201ENST00000507378 601 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 RN7SKP260-201ENST00000516907 149 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 AC092490.3-201ENST00000545370 572 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 AC007954.1-201ENST00000554198 494 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 AC008507.1-201ENST00000587506 734 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 AC006116.3-201ENST00000592968 361 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 AC044792.1-201ENST00000593294 196 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 AC008814.1-201ENST00000603797 406 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 AC006338.1-201ENST00000618453 749 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 MIR6719-201ENST00000622428 87 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 PCMTD1P7-201ENST00000634506 357 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 AC099654.5-201ENST00000636479 350 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 MTND1P37-201ENST00000636562 264 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 AC027228.2-201ENST00000567141 2154 ntBASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
CDK5RAP1Q96SZ6 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 NXF4-202ENST00000416098 1465 ntBASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 AP001029.2-203ENST00000589795 4910 ntBASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 RN7SKP145-201ENST00000363291 303 ntBASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 DPPA2P3-201ENST00000411853 655 ntBASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 UBTFL3-201ENST00000418934 1024 ntBASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 OR8F1P-201ENST00000425243 930 ntBASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 AL136231.1-201ENST00000429407 730 ntBASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 NPM1P18-201ENST00000434232 732 ntBASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 GAPDHP58-201ENST00000438477 1006 ntBASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 ARL5AP2-201ENST00000444698 533 ntBASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 LINC01309-201ENST00000444795 492 ntTSL 3 BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 AC016687.1-201ENST00000482574 353 ntBASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 RNU6-314P-201ENST00000516574 104 ntBASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 MIR5708-201ENST00000579723 85 ntBASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 BX323046.1-201ENST00000610145 535 ntBASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 AC011472.4-201ENST00000615848 491 ntBASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 AC068870.2-201ENST00000620635 389 ntBASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 DUXAP9-208ENST00000622815 614 ntBASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
CDK5RAP1Q96SZ6 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CDK5RAP1Q96SZ6 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms