Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 CKS1BP3-201ENST00000600888 237 ntBASIC6.01□□□□□ -1.45
IFT140Q96RY7 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC6.01□□□□□ -1.45
IFT140Q96RY7 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.01□□□□□ -1.45
IFT140Q96RY7 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
IFT140Q96RY7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC6.01□□□□□ -1.45
IFT140Q96RY7 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
IFT140Q96RY7 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
IFT140Q96RY7 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
IFT140Q96RY7 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC6□□□□□ -1.45
IFT140Q96RY7 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
IFT140Q96RY7 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC6□□□□□ -1.45
IFT140Q96RY7 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
IFT140Q96RY7 RNA5SP126-201ENST00000365092 109 ntBASIC6□□□□□ -1.45
IFT140Q96RY7 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC6□□□□□ -1.45
IFT140Q96RY7 RNA5SP80-201ENST00000410475 111 ntBASIC6□□□□□ -1.45
IFT140Q96RY7 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6□□□□□ -1.45
IFT140Q96RY7 RPL7P28-201ENST00000437739 740 ntBASIC6□□□□□ -1.45
IFT140Q96RY7 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC6□□□□□ -1.45
IFT140Q96RY7 RPL31P61-201ENST00000496160 376 ntBASIC6□□□□□ -1.45
IFT140Q96RY7 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC6□□□□□ -1.45
IFT140Q96RY7 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC6□□□□□ -1.45
IFT140Q96RY7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC6□□□□□ -1.45
IFT140Q96RY7 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6□□□□□ -1.45
IFT140Q96RY7 APAF1-207ENST00000547743 651 ntTSL 3 BASIC6□□□□□ -1.45
IFT140Q96RY7 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6□□□□□ -1.45
IFT140Q96RY7 LSM1P2-201ENST00000604911 322 ntBASIC6□□□□□ -1.45
IFT140Q96RY7 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC6□□□□□ -1.45
IFT140Q96RY7 SRP72P2-201ENST00000344851 1979 ntBASIC6□□□□□ -1.45
IFT140Q96RY7 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
IFT140Q96RY7 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
IFT140Q96RY7 FAM35BP-202ENST00000497389 3337 ntBASIC5.99□□□□□ -1.45
IFT140Q96RY7 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
IFT140Q96RY7 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
IFT140Q96RY7 IARS-201ENST00000375627 697 ntTSL 3 BASIC5.99□□□□□ -1.45
IFT140Q96RY7 BX323014.1-201ENST00000412876 237 ntBASIC5.99□□□□□ -1.45
IFT140Q96RY7 SEPT7P8-201ENST00000413308 775 ntBASIC5.99□□□□□ -1.45
IFT140Q96RY7 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
IFT140Q96RY7 GEMIN8P3-201ENST00000445417 720 ntBASIC5.99□□□□□ -1.45
IFT140Q96RY7 U3.44-201ENST00000458938 192 ntBASIC5.99□□□□□ -1.45
IFT140Q96RY7 RN7SL585P-201ENST00000470538 280 ntBASIC5.99□□□□□ -1.45
IFT140Q96RY7 AC025554.1-201ENST00000505641 188 ntBASIC5.99□□□□□ -1.45
IFT140Q96RY7 AC118465.1-201ENST00000513820 1271 ntBASIC5.99□□□□□ -1.45
IFT140Q96RY7 AC113192.3-201ENST00000529152 742 ntBASIC5.99□□□□□ -1.45
IFT140Q96RY7 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC5.99□□□□□ -1.45
IFT140Q96RY7 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.99□□□□□ -1.45
IFT140Q96RY7 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.99□□□□□ -1.45
IFT140Q96RY7 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
IFT140Q96RY7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
IFT140Q96RY7 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.99□□□□□ -1.45
IFT140Q96RY7 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
IFT140Q96RY7 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
IFT140Q96RY7 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
IFT140Q96RY7 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
IFT140Q96RY7 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
IFT140Q96RY7 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
IFT140Q96RY7 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.98□□□□□ -1.45
IFT140Q96RY7 AC107083.1-201ENST00000439643 279 ntBASIC5.98□□□□□ -1.45
IFT140Q96RY7 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
IFT140Q96RY7 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC5.98□□□□□ -1.45
IFT140Q96RY7 AL162274.2-201ENST00000614406 332 ntBASIC5.98□□□□□ -1.45
IFT140Q96RY7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC5.98□□□□□ -1.45
IFT140Q96RY7 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
IFT140Q96RY7 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC5.98□□□□□ -1.45
IFT140Q96RY7 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
IFT140Q96RY7 AC083843.2-201ENST00000568248 6253 ntBASIC5.98□□□□□ -1.45
IFT140Q96RY7 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC5.98□□□□□ -1.45
IFT140Q96RY7 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.98□□□□□ -1.45
IFT140Q96RY7 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
IFT140Q96RY7 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC5.98□□□□□ -1.45
IFT140Q96RY7 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
IFT140Q96RY7 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
IFT140Q96RY7 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC5.98□□□□□ -1.45
IFT140Q96RY7 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
IFT140Q96RY7 AC024341.1-201ENST00000526444 1552 ntBASIC5.98□□□□□ -1.45
IFT140Q96RY7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
IFT140Q96RY7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
IFT140Q96RY7 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
IFT140Q96RY7 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.97□□□□□ -1.45
IFT140Q96RY7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC5.97□□□□□ -1.45
IFT140Q96RY7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.97□□□□□ -1.45
IFT140Q96RY7 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.97□□□□□ -1.45
IFT140Q96RY7 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.97□□□□□ -1.45
IFT140Q96RY7 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC5.97□□□□□ -1.45
IFT140Q96RY7 MIR3936-201ENST00000584304 110 ntBASIC5.97□□□□□ -1.45
IFT140Q96RY7 AL390816.3-201ENST00000604527 1066 ntBASIC5.97□□□□□ -1.45
IFT140Q96RY7 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
IFT140Q96RY7 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
IFT140Q96RY7 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.97□□□□□ -1.45
IFT140Q96RY7 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
IFT140Q96RY7 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.97□□□□□ -1.45
IFT140Q96RY7 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
IFT140Q96RY7 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
IFT140Q96RY7 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC5.97□□□□□ -1.45
IFT140Q96RY7 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
IFT140Q96RY7 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
IFT140Q96RY7 AL357075.1-201ENST00000404107 726 ntBASIC5.96□□□□□ -1.45
IFT140Q96RY7 AL139095.1-201ENST00000404326 391 ntBASIC5.96□□□□□ -1.45
IFT140Q96RY7 LIPT1P1-201ENST00000415870 1186 ntBASIC5.96□□□□□ -1.45
IFT140Q96RY7 MORF4L2P1-201ENST00000503761 858 ntBASIC5.96□□□□□ -1.45
IFT140Q96RY7 AC068020.1-201ENST00000594215 661 ntBASIC5.96□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms