Protein–RNA interactions for Protein: Q96CG8

CTHRC1, Collagen triple helix repeat-containing protein 1, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1Q96CG8 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AC104260.2-201ENST00000623551 3497 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 GVINP1-202ENST00000531871 7271 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 RNU6-500P-201ENST00000362349 107 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 RNU6-115P-201ENST00000364310 107 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AL645927.1-201ENST00000396783 406 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 SNORA11B-201ENST00000408175 129 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 SNORA77-201ENST00000408716 125 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 RN7SKP213-201ENST00000410746 298 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AC007394.1-201ENST00000421941 531 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 DLGAP5P1-201ENST00000430307 464 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 ACTR3P2-201ENST00000439585 1257 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AL450023.3-201ENST00000440592 271 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 ELOCP30-201ENST00000447108 299 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 NF1P3-201ENST00000457709 450 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 RNU6-1218P-201ENST00000458990 108 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AC091180.1-201ENST00000462104 372 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 RPS18P6-201ENST00000476880 458 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 RPSAP50-201ENST00000481955 852 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AC091965.2-201ENST00000512324 613 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 snoU109.6-201ENST00000516831 118 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 RN7SKP260-201ENST00000516907 149 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 RNU6-1261P-201ENST00000517194 104 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 MIR3691-201ENST00000578066 90 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AC105254.2-201ENST00000603636 436 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AL445222.1-201ENST00000607259 628 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AC103591.3-201ENST00000608684 209 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AP000254.1-201ENST00000609934 520 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AL627230.1-201ENST00000613077 211 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AL591926.8-201ENST00000616876 211 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 CR392039.4-201ENST00000624968 501 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AC090582.1-201ENST00000636321 199 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 AL450345.1-202ENST00000605741 3881 ntBASIC4.72□□□□□ -1.65
CTHRC1Q96CG8 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.71□□□□□ -1.65
CTHRC1Q96CG8 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 RNU6-192P-201ENST00000391253 100 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AC013442.1-201ENST00000397347 228 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 MIR1284-201ENST00000408337 120 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 RPL7P8-201ENST00000411964 730 ntBASIC4.71□□□□□ -1.66
CTHRC1Q96CG8 USP9YP33-201ENST00000412220 421 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms