Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC020910.3-201ENST00000603701 874 ntBASIC5.78□□□□□ -1.48
CHMP4CQ96CF2 AC097478.2-201ENST00000610572 514 ntBASIC5.78□□□□□ -1.48
CHMP4CQ96CF2 AC116447.1-201ENST00000613153 453 ntBASIC5.78□□□□□ -1.48
CHMP4CQ96CF2 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHMP4CQ96CF2 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.78□□□□□ -1.48
CHMP4CQ96CF2 AP003485.2-201ENST00000623636 610 ntBASIC5.78□□□□□ -1.48
CHMP4CQ96CF2 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHMP4CQ96CF2 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHMP4CQ96CF2 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CHMP4CQ96CF2 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHMP4CQ96CF2 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CHMP4CQ96CF2 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 DCAF13P3-201ENST00000561147 1334 ntBASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 FAM133CP-201ENST00000332869 704 ntBASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 R3HCC1L-204ENST00000370586 941 ntTSL 3 BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 ATP5F1P2-201ENST00000398143 760 ntBASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 VDAC2P1-201ENST00000399358 958 ntBASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 EIF4HP2-201ENST00000424380 563 ntBASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 RPL7P34-201ENST00000433316 712 ntBASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 AL451139.1-201ENST00000434718 346 ntBASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 AC092393.1-201ENST00000439625 742 ntBASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 NECAP1P2-201ENST00000455668 727 ntBASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 RPS29P33-201ENST00000456717 146 ntBASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 RN7SL459P-201ENST00000481078 302 ntBASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 AC104971.1-201ENST00000495117 578 ntBASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 RNU5A-4P-201ENST00000516588 111 ntBASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 HIGD1AP6-201ENST00000521833 279 ntBASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 AC079075.1-201ENST00000559543 878 ntBASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 DUXAP3-201ENST00000603616 594 ntBASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 AP001521.2-201ENST00000608772 546 ntBASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 AC107075.1-201ENST00000613695 314 ntBASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 MIR7703-201ENST00000620784 77 ntBASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 CR381572.2-201ENST00000624852 397 ntBASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.77□□□□□ -1.49
CHMP4CQ96CF2 AL118496.1-201ENST00000440201 1812 ntBASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 RNU6-839P-201ENST00000363347 108 ntBASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 RNU6-1214P-201ENST00000363650 109 ntBASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 RNU6-603P-201ENST00000411403 107 ntBASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 RPL36AP10-201ENST00000421785 322 ntBASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 CKS1BP6-201ENST00000424932 240 ntBASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 RPS6P15-201ENST00000431996 751 ntBASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 COX7BP2-201ENST00000437976 242 ntBASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 FGF7P5-201ENST00000441829 291 ntBASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 EXTL2P1-201ENST00000446218 416 ntBASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 AC108734.3-201ENST00000481241 1165 ntBASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 AC007686.1-201ENST00000488511 463 ntBASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 AC002456.2-201ENST00000509356 380 ntBASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 AC109471.1-201ENST00000511631 612 ntBASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 ZNF321P-202ENST00000550843 495 ntBASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 AC004217.3-201ENST00000551552 878 ntBASIC5.76□□□□□ -1.49
CHMP4CQ96CF2 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms