Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HLA-CQ95604 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
HLA-CQ95604 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HLA-CQ95604 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
HLA-CQ95604 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
HLA-CQ95604 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.99□□□□□ -1.29
HLA-CQ95604 AL445437.1-201ENST00000623157 3087 ntBASIC6.99□□□□□ -1.29
HLA-CQ95604 HYDIN2-203ENST00000614586 13885 ntBASIC6.99□□□□□ -1.29
HLA-CQ95604 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
HLA-CQ95604 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.99□□□□□ -1.29
HLA-CQ95604 GDNF-208ENST00000620847 3638 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HLA-CQ95604 ADAMTS9-AS2-203ENST00000481312 1970 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
HLA-CQ95604 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC6.98□□□□□ -1.29
HLA-CQ95604 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-CQ95604 ZNF385B-201ENST00000336917 2610 ntTSL 5 BASIC6.98□□□□□ -1.29
HLA-CQ95604 ATP1A4-201ENST00000368081 3839 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-CQ95604 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-CQ95604 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-CQ95604 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.98□□□□□ -1.29
HLA-CQ95604 LINC02431-202ENST00000505329 1788 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-CQ95604 CYB5B-201ENST00000307892 4286 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-CQ95604 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-CQ95604 AC243772.3-201ENST00000617878 1537 ntTSL 5 BASIC6.98□□□□□ -1.29
HLA-CQ95604 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-CQ95604 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC6.98□□□□□ -1.29
HLA-CQ95604 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC6.98□□□□□ -1.29
HLA-CQ95604 RNA5SP258-201ENST00000362750 119 ntBASIC6.98□□□□□ -1.29
HLA-CQ95604 RNU6-97P-201ENST00000363387 104 ntBASIC6.98□□□□□ -1.29
HLA-CQ95604 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-CQ95604 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
HLA-CQ95604 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC6.98□□□□□ -1.29
HLA-CQ95604 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC6.98□□□□□ -1.29
HLA-CQ95604 AC022022.1-201ENST00000430304 178 ntBASIC6.98□□□□□ -1.29
HLA-CQ95604 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-CQ95604 RPL37P1-201ENST00000432310 284 ntBASIC6.98□□□□□ -1.29
HLA-CQ95604 AL645936.1-201ENST00000441979 518 ntBASIC6.98□□□□□ -1.29
HLA-CQ95604 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.98□□□□□ -1.29
HLA-CQ95604 CBX1P2-201ENST00000453841 458 ntBASIC6.98□□□□□ -1.29
HLA-CQ95604 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.98□□□□□ -1.29
HLA-CQ95604 RPL7P43-201ENST00000478876 753 ntBASIC6.98□□□□□ -1.29
HLA-CQ95604 RPL22P13-201ENST00000493291 347 ntBASIC6.98□□□□□ -1.29
HLA-CQ95604 SNX18P24-201ENST00000505249 671 ntBASIC6.98□□□□□ -1.29
HLA-CQ95604 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.98□□□□□ -1.29
HLA-CQ95604 HMGN1P9-201ENST00000515212 298 ntBASIC6.98□□□□□ -1.29
HLA-CQ95604 RNA5SP418-201ENST00000515951 117 ntBASIC6.98□□□□□ -1.29
HLA-CQ95604 RNU6-1016P-201ENST00000516689 94 ntBASIC6.98□□□□□ -1.29
HLA-CQ95604 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.98□□□□□ -1.29
HLA-CQ95604 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC6.98□□□□□ -1.29
HLA-CQ95604 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.98□□□□□ -1.29
HLA-CQ95604 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.98□□□□□ -1.29
HLA-CQ95604 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC6.98□□□□□ -1.29
HLA-CQ95604 AC007225.2-201ENST00000562529 256 ntBASIC6.98□□□□□ -1.29
HLA-CQ95604 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.98□□□□□ -1.29
HLA-CQ95604 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.98□□□□□ -1.29
HLA-CQ95604 AC115085.1-201ENST00000588924 229 ntBASIC6.98□□□□□ -1.29
HLA-CQ95604 AC016229.2-201ENST00000591331 417 ntTSL 2 BASIC6.98□□□□□ -1.29
HLA-CQ95604 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.98□□□□□ -1.29
HLA-CQ95604 AC020634.1-201ENST00000608701 549 ntBASIC6.98□□□□□ -1.29
HLA-CQ95604 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.98□□□□□ -1.29
HLA-CQ95604 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.98□□□□□ -1.29
HLA-CQ95604 AC245517.5-201ENST00000611529 162 ntBASIC6.98□□□□□ -1.29
HLA-CQ95604 NAA60-237ENST00000615865 326 ntTSL 5 BASIC6.98□□□□□ -1.29
HLA-CQ95604 AC010378.1-201ENST00000619270 362 ntBASIC6.98□□□□□ -1.29
HLA-CQ95604 AC069234.4-201ENST00000621276 412 ntBASIC6.98□□□□□ -1.29
HLA-CQ95604 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.98□□□□□ -1.29
HLA-CQ95604 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.98□□□□□ -1.29
HLA-CQ95604 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-CQ95604 DHX40P1-201ENST00000588725 1412 ntBASIC6.98□□□□□ -1.29
HLA-CQ95604 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-CQ95604 OR52B5P-204ENST00000641744 3467 ntBASIC6.98□□□□□ -1.29
HLA-CQ95604 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC6.98□□□□□ -1.29
HLA-CQ95604 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-CQ95604 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-CQ95604 SPOCK1-201ENST00000282223 4488 ntTSL 5 BASIC6.98□□□□□ -1.29
HLA-CQ95604 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC6.98□□□□□ -1.29
HLA-CQ95604 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-CQ95604 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC6.98□□□□□ -1.29
HLA-CQ95604 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC6.98□□□□□ -1.29
HLA-CQ95604 PKP4-217ENST00000628904 3856 ntTSL 5 BASIC6.98□□□□□ -1.29
HLA-CQ95604 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
HLA-CQ95604 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-CQ95604 AC114401.1-201ENST00000484222 2084 ntTSL 2 BASIC6.97□□□□□ -1.29
HLA-CQ95604 C5orf34-201ENST00000306862 2507 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-CQ95604 AC244502.1-201ENST00000514473 1951 ntTSL 2 BASIC6.97□□□□□ -1.29
HLA-CQ95604 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-CQ95604 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
HLA-CQ95604 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-CQ95604 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-CQ95604 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-CQ95604 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
HLA-CQ95604 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.97□□□□□ -1.29
HLA-CQ95604 RNA5SP242-201ENST00000364171 118 ntBASIC6.97□□□□□ -1.29
HLA-CQ95604 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-CQ95604 RPL24P7-201ENST00000399435 453 ntBASIC6.97□□□□□ -1.29
HLA-CQ95604 AC012462.2-201ENST00000414756 391 ntTSL 3 BASIC6.97□□□□□ -1.29
HLA-CQ95604 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-CQ95604 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
HLA-CQ95604 PDSS1P1-201ENST00000422953 1114 ntBASIC6.97□□□□□ -1.29
HLA-CQ95604 AC008267.5-201ENST00000424928 265 ntBASIC6.97□□□□□ -1.29
HLA-CQ95604 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 184.2 ms