Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 BUD31P2-201ENST00000449374 300 ntBASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 AC092691.2-201ENST00000461787 803 ntBASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 MTND6P6-201ENST00000478031 263 ntBASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 PCNAP1-201ENST00000505363 709 ntBASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 MRPL49P2-201ENST00000521066 465 ntBASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 SMARCE1P4-201ENST00000523647 241 ntBASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 CYCSP29-201ENST00000533731 318 ntBASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 AL133457.1-201ENST00000564251 987 ntBASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 MIR4644-201ENST00000579929 84 ntBASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 MIR3939-201ENST00000582614 106 ntBASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 PSMA6P4-201ENST00000603247 718 ntBASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 MIR7151-201ENST00000617477 60 ntBASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 AC010608.2-201ENST00000624830 470 ntBASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.31□□□□□ -1.88
RTN4IP1Q8WWV3 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AC095050.2-201ENST00000510748 1458 ntBASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 RNU6-304P-201ENST00000364855 107 ntBASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 MIR7-1-201ENST00000384871 110 ntBASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 RNU11-4P-201ENST00000391149 133 ntBASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AMZ2P2-201ENST00000406819 1057 ntBASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 HSPE1P12-201ENST00000412576 301 ntBASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AC093698.1-201ENST00000423843 571 ntBASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AL138785.1-201ENST00000425821 331 ntBASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AL365396.1-201ENST00000430854 671 ntBASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 HMGB1P37-201ENST00000439613 609 ntBASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 RPS4XP4-201ENST00000443195 763 ntBASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AL645939.1-201ENST00000453429 797 ntBASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AC010618.1-201ENST00000469924 477 ntBASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 NDUFA5P9-201ENST00000472609 340 ntBASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 RPL7P24-201ENST00000493052 752 ntBASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AC020593.1-201ENST00000507399 299 ntBASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 SNORA31.9-201ENST00000516429 84 ntBASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AC239803.2-201ENST00000610161 430 ntBASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 MIR6716-201ENST00000613413 80 ntBASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AC145207.9-201ENST00000623802 325 ntBASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AC104820.1-201ENST00000624183 307 ntBASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 OR52H1-202ENST00000641796 1061 ntBASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
RTN4IP1Q8WWV3 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 AC009951.1-201ENST00000623674 2614 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 AL445437.1-201ENST00000623157 3087 ntBASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 GTDC1-206ENST00000409214 2954 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
RTN4IP1Q8WWV3 OR5T3-201ENST00000303059 1023 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 150.3 ms