Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 RNA5SP399-201ENST00000364003 117 ntBASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 RNA5SP130-201ENST00000364431 114 ntBASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 AC244033.1-201ENST00000426826 870 ntBASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 KCTD9P3-201ENST00000434597 1169 ntBASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 RPS11P1-201ENST00000451072 473 ntBASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 CALM1P2-201ENST00000452941 448 ntBASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 RPL23AP62-201ENST00000463396 453 ntBASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 AC010618.1-201ENST00000469924 477 ntBASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 RN7SL860P-201ENST00000473738 223 ntBASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 TRAV31-201ENST00000502780 342 ntBASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 AC138701.1-201ENST00000524329 714 ntBASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 AC091516.1-201ENST00000549191 703 ntBASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 AC025884.1-201ENST00000556034 378 ntBASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 AC103808.1-201ENST00000579833 922 ntTSL 3 BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 AC067852.4-201ENST00000590314 478 ntBASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 MRPS35P3-201ENST00000603189 709 ntBASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 AP003392.5-201ENST00000607857 415 ntBASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 AC022960.2-201ENST00000616300 666 ntBASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 AC105105.5-201ENST00000622635 1294 ntBASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 MIR492-201ENST00000638676 116 ntBASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 OR5AC4P-202ENST00000642086 985 ntBASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 AC007342.7-201ENST00000624610 2337 ntBASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 MAPK10-372ENST00000641954 3413 ntBASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 IPO8P1-201ENST00000455509 3109 ntBASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
ZNF439Q8NDP4 MTND4P10-201ENST00000446199 1363 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 BDP1P-201ENST00000582658 1990 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 DCAF13P1-201ENST00000495256 1330 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 UBE3AP2-201ENST00000429033 2259 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 SNORD6-201ENST00000365444 73 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 RN7SKP222-201ENST00000410651 315 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 GAS5-208ENST00000425771 242 ntTSL 3 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 HIGD1AP4-201ENST00000430194 280 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 AL365396.1-201ENST00000430854 671 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 AC087650.1-201ENST00000431445 468 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 ATP5HP2-201ENST00000433885 485 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 AC096638.2-201ENST00000434965 711 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 AL138799.3-201ENST00000438968 350 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 HMGB1P37-201ENST00000439613 609 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 YWHAQP9-201ENST00000445891 512 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 MTND5P21-201ENST00000531961 522 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 YPEL5P3-201ENST00000547227 352 ntBASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.25□□□□□ -1.89
ZNF439Q8NDP4 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms