Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 AC097504.1-201ENST00000515103 2415 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 AC008033.1-201ENST00000216407 1162 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 OR10J6P-201ENST00000289731 930 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 MIR3065-201ENST00000390137 79 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 SNORD66.1-201ENST00000391230 76 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 LAP3P1-201ENST00000403648 294 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 AC009480.2-201ENST00000422916 432 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 OR5AW1P-201ENST00000426334 1006 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 DNAJC19P7-201ENST00000428811 344 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 ELOCP18-201ENST00000434209 337 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 MRPL35P4-201ENST00000453682 566 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 AC053481.1-201ENST00000467217 306 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 S100A11P1-201ENST00000477525 312 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 RN7SL459P-201ENST00000481078 302 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 AC013356.1-201ENST00000489027 564 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 RN7SL812P-201ENST00000493791 279 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 AC108145.1-201ENST00000503770 153 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 ATP1B1P1-201ENST00000509767 915 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 IGLVIV-66-1-201ENST00000521832 460 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 AC024341.1-201ENST00000526444 1552 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 AC106734.1-201ENST00000568646 663 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 MIR4700-201ENST00000578311 74 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 EIF1P6-201ENST00000600054 334 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 AC068254.2-201ENST00000623938 3577 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 AC025125.1-201ENST00000624743 1922 ntBASIC3.91□□□□□ -1.78
NIPAL3Q6P499 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
NIPAL3Q6P499 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.78
NIPAL3Q6P499 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
NIPAL3Q6P499 AC046144.1-201ENST00000478559 1853 ntBASIC3.9□□□□□ -1.78
NIPAL3Q6P499 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
NIPAL3Q6P499 ERCC6-202ENST00000374127 1782 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.9□□□□□ -1.79
NIPAL3Q6P499 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.9□□□□□ -1.79
NIPAL3Q6P499 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NIPAL3Q6P499 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NIPAL3Q6P499 MIR16-2-201ENST00000362117 81 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 RNA5SP388-201ENST00000362584 119 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 RNU6-1339P-201ENST00000363574 91 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 RNA5SP447-201ENST00000363749 119 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 MIR124-3-201ENST00000384866 87 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 RNU4-27P-201ENST00000410889 139 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.9□□□□□ -1.79
NIPAL3Q6P499 RBMY1KP-201ENST00000423480 476 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 AL590762.3-201ENST00000436372 640 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 UBE2V1P5-201ENST00000440070 405 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 PHBP16-201ENST00000446318 950 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC3.9□□□□□ -1.79
NIPAL3Q6P499 Z95152.1-201ENST00000453556 656 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 DHFRP3-201ENST00000455595 559 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC3.9□□□□□ -1.79
NIPAL3Q6P499 RPS20P21-201ENST00000466859 343 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 AC006463.2-201ENST00000473326 348 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.9□□□□□ -1.79
NIPAL3Q6P499 HMGB3P13-201ENST00000511263 607 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC3.9□□□□□ -1.79
NIPAL3Q6P499 MTND2P31-201ENST00000512602 616 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.9□□□□□ -1.79
NIPAL3Q6P499 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.9□□□□□ -1.79
NIPAL3Q6P499 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.9□□□□□ -1.79
NIPAL3Q6P499 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC3.9□□□□□ -1.79
NIPAL3Q6P499 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC3.9□□□□□ -1.79
NIPAL3Q6P499 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
NIPAL3Q6P499 AC113194.1-201ENST00000606037 500 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 AC090948.1-201ENST00000607464 549 ntBASIC3.9□□□□□ -1.79
NIPAL3Q6P499 AC245100.7-201ENST00000609678 442 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms