Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC106785.1-201ENST00000565935 262 ntBASIC3.84□□□□□ -1.79
H3F3CQ6NXT2 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC3.84□□□□□ -1.79
H3F3CQ6NXT2 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.84□□□□□ -1.79
H3F3CQ6NXT2 AC067852.4-201ENST00000590314 478 ntBASIC3.84□□□□□ -1.79
H3F3CQ6NXT2 AC022916.3-201ENST00000592961 742 ntBASIC3.84□□□□□ -1.79
H3F3CQ6NXT2 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
H3F3CQ6NXT2 LINC02471-203ENST00000641941 4752 ntBASIC3.84□□□□□ -1.79
H3F3CQ6NXT2 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
H3F3CQ6NXT2 PTER-201ENST00000298942 3448 ntTSL 5 BASIC3.84□□□□□ -1.8
H3F3CQ6NXT2 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.8
H3F3CQ6NXT2 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.8
H3F3CQ6NXT2 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
H3F3CQ6NXT2 RLIMP1-201ENST00000339626 1680 ntBASIC3.84□□□□□ -1.8
H3F3CQ6NXT2 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.84□□□□□ -1.8
H3F3CQ6NXT2 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
H3F3CQ6NXT2 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
H3F3CQ6NXT2 AL031985.3-201ENST00000565390 2449 ntBASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 RNU1-64P-201ENST00000365443 163 ntBASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 MIR124-3-201ENST00000384866 87 ntBASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 RNU11-4P-201ENST00000391149 133 ntBASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 KCTD10P1-201ENST00000434203 625 ntBASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 HLA-N-201ENST00000437516 135 ntBASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 Z99127.2-201ENST00000441426 334 ntBASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 RPL7P1-201ENST00000468161 747 ntBASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 RPL7P9-201ENST00000468715 747 ntBASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 AF213884.1-201ENST00000488102 463 ntBASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 AC108145.1-201ENST00000503770 153 ntBASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 FABP5P6-201ENST00000510588 409 ntBASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 AC022655.2-201ENST00000577280 318 ntBASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 AL109618.2-201ENST00000605527 211 ntBASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 AC135803.1-201ENST00000608748 565 ntBASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 MIR7973-1-201ENST00000614683 76 ntBASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 AC007390.2-201ENST00000606229 3803 ntBASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
H3F3CQ6NXT2 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 AC097504.1-201ENST00000515103 2415 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 AC116667.1-201ENST00000604855 2072 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 CASC19-261ENST00000641853 1638 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 AC067945.1-201ENST00000342609 618 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 MIR421-201ENST00000365696 85 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 RNU6-185P-201ENST00000384421 107 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 AL445189.1-201ENST00000405722 338 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 RPL21P65-201ENST00000406094 466 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 VN1R8P-201ENST00000407739 893 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 RNU6-628P-201ENST00000410675 107 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 AC073335.1-201ENST00000427776 363 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 ELOCP18-201ENST00000434209 337 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 ELOCP11-201ENST00000436690 332 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 AC006011.1-201ENST00000442758 349 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 ELOCP16-201ENST00000444494 332 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 AL162151.2-201ENST00000448875 158 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 MTND2P8-201ENST00000450555 1025 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 RPL38P1-201ENST00000460914 211 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 HPRT1P2-201ENST00000505250 544 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 AC018797.3-201ENST00000513388 1241 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 AC026402.1-201ENST00000513642 170 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 AC016550.3-201ENST00000515706 767 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 CYP4A43P-201ENST00000568156 121 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 MIR4286-201ENST00000580651 93 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 AC115085.1-201ENST00000588924 229 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 AC115621.1-201ENST00000604653 858 ntBASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.82□□□□□ -1.8
H3F3CQ6NXT2 AC078899.5-201ENST00000612475 178 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 118 ms