Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AC117522.2-201ENST00000510049 657 ntBASIC5.56□□□□□ -1.52
LONRF3Q496Y0 AC118465.1-201ENST00000513820 1271 ntBASIC5.56□□□□□ -1.52
LONRF3Q496Y0 AC092593.2-201ENST00000513866 913 ntBASIC5.56□□□□□ -1.52
LONRF3Q496Y0 RNU6-202P-201ENST00000515998 96 ntBASIC5.56□□□□□ -1.52
LONRF3Q496Y0 AC021006.3-201ENST00000530771 192 ntBASIC5.56□□□□□ -1.52
LONRF3Q496Y0 PTP4A1P6-201ENST00000531034 478 ntBASIC5.56□□□□□ -1.52
LONRF3Q496Y0 AC008033.2-201ENST00000542626 177 ntBASIC5.56□□□□□ -1.52
LONRF3Q496Y0 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC5.56□□□□□ -1.52
LONRF3Q496Y0 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC5.56□□□□□ -1.52
LONRF3Q496Y0 AC023813.2-201ENST00000564321 469 ntBASIC5.56□□□□□ -1.52
LONRF3Q496Y0 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC5.56□□□□□ -1.52
LONRF3Q496Y0 AP005119.2-201ENST00000579735 1105 ntBASIC5.56□□□□□ -1.52
LONRF3Q496Y0 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC5.56□□□□□ -1.52
LONRF3Q496Y0 AC069366.1-201ENST00000583159 838 ntBASIC5.56□□□□□ -1.52
LONRF3Q496Y0 RN7SL435P-201ENST00000584418 282 ntBASIC5.56□□□□□ -1.52
LONRF3Q496Y0 AC011487.3-201ENST00000593607 453 ntBASIC5.56□□□□□ -1.52
LONRF3Q496Y0 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC5.56□□□□□ -1.52
LONRF3Q496Y0 MTND3P19-201ENST00000603825 345 ntBASIC5.56□□□□□ -1.52
LONRF3Q496Y0 MEMO1P5-201ENST00000604810 406 ntBASIC5.56□□□□□ -1.52
LONRF3Q496Y0 AC010680.4-201ENST00000605334 543 ntBASIC5.56□□□□□ -1.52
LONRF3Q496Y0 AC017037.3-201ENST00000625016 472 ntBASIC5.56□□□□□ -1.52
LONRF3Q496Y0 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
LONRF3Q496Y0 XPOTP1-201ENST00000443317 2398 ntBASIC5.56□□□□□ -1.52
LONRF3Q496Y0 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.56□□□□□ -1.52
LONRF3Q496Y0 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 SALL4P2-201ENST00000423288 2910 ntBASIC5.55□□□□□ -1.52
LONRF3Q496Y0 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 GHR-202ENST00000357703 4316 ntTSL 5 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 AC008549.2-201ENST00000333482 706 ntBASIC5.55□□□□□ -1.52
LONRF3Q496Y0 RNU4-92P-201ENST00000363783 136 ntBASIC5.55□□□□□ -1.52
LONRF3Q496Y0 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 SNORA66-201ENST00000384792 133 ntBASIC5.55□□□□□ -1.52
LONRF3Q496Y0 AC136624.1-201ENST00000400791 413 ntBASIC5.55□□□□□ -1.52
LONRF3Q496Y0 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 AL356320.2-201ENST00000417263 507 ntBASIC5.55□□□□□ -1.52
LONRF3Q496Y0 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 CKS1BP6-201ENST00000424932 240 ntBASIC5.55□□□□□ -1.52
LONRF3Q496Y0 C1DP1-201ENST00000426049 402 ntBASIC5.55□□□□□ -1.52
LONRF3Q496Y0 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 OR7E125P-201ENST00000443450 846 ntBASIC5.55□□□□□ -1.52
LONRF3Q496Y0 AC112498.1-201ENST00000444401 332 ntBASIC5.55□□□□□ -1.52
LONRF3Q496Y0 RNF148-202ENST00000447240 839 ntTSL 2 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 AC112492.1-201ENST00000449607 712 ntBASIC5.55□□□□□ -1.52
LONRF3Q496Y0 RHEBP2-201ENST00000450289 600 ntBASIC5.55□□□□□ -1.52
LONRF3Q496Y0 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 S100A11P1-201ENST00000477525 312 ntBASIC5.55□□□□□ -1.52
LONRF3Q496Y0 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 AC140172.1-201ENST00000502928 141 ntBASIC5.55□□□□□ -1.52
LONRF3Q496Y0 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 RNA5SP392-201ENST00000516905 112 ntBASIC5.55□□□□□ -1.52
LONRF3Q496Y0 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 AGGF1P6-201ENST00000569213 976 ntBASIC5.55□□□□□ -1.52
LONRF3Q496Y0 MIR3936-201ENST00000584304 110 ntBASIC5.55□□□□□ -1.52
LONRF3Q496Y0 AC040904.1-201ENST00000590850 223 ntBASIC5.55□□□□□ -1.52
LONRF3Q496Y0 AC091057.2-201ENST00000602594 792 ntBASIC5.55□□□□□ -1.52
LONRF3Q496Y0 AC007349.4-201ENST00000608114 532 ntBASIC5.55□□□□□ -1.52
LONRF3Q496Y0 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 AC099669.2-201ENST00000616549 437 ntBASIC5.55□□□□□ -1.52
LONRF3Q496Y0 AK6-205ENST00000618980 483 ntTSL 2 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 AC138393.1-206ENST00000540997 1886 ntBASIC5.55□□□□□ -1.52
LONRF3Q496Y0 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.55□□□□□ -1.52
LONRF3Q496Y0 AC111188.2-201ENST00000529697 1387 ntBASIC5.55□□□□□ -1.52
LONRF3Q496Y0 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 U3.15-201ENST00000365398 212 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 GLULP6-201ENST00000399502 913 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 AL357515.1-201ENST00000402967 542 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.54□□□□□ -1.52
LONRF3Q496Y0 RPL36AP10-201ENST00000421785 322 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 DDX39BP1-205ENST00000422507 192 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 RGS17P1-201ENST00000423358 553 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 EIF4HP2-201ENST00000424380 563 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 HIGD1AP12-201ENST00000427832 281 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 AC008065.1-201ENST00000428525 348 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 NPM1P34-201ENST00000428821 893 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 TXNL1P1-201ENST00000429528 554 ntBASIC5.54□□□□□ -1.52
LONRF3Q496Y0 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 158.3 ms