Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
SCN1BQ07699 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.15□□□□□ -1.75
SCN1BQ07699 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.15□□□□□ -1.75
SCN1BQ07699 MTCO1P24-201ENST00000515438 1558 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SCN1BQ07699 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
SCN1BQ07699 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SCN1BQ07699 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
SCN1BQ07699 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SCN1BQ07699 THAP12P4-201ENST00000528321 2266 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SCN1BQ07699 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SCN1BQ07699 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
SCN1BQ07699 RNU6-171P-201ENST00000384354 107 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
SCN1BQ07699 VN1R8P-201ENST00000407739 893 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 AC027644.1-201ENST00000419595 298 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 LINC00993-201ENST00000420453 540 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 AL355433.1-201ENST00000422804 300 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 PTP4A1P7-201ENST00000423476 514 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 AC005517.2-201ENST00000424673 553 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 MTCYBP32-201ENST00000427945 1084 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 AC011242.1-201ENST00000433596 1158 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 KNOP1P3-201ENST00000446933 426 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 EIF2S2P2-201ENST00000447161 982 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 TPT1P13-201ENST00000449760 499 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 NDUFA5P7-201ENST00000452914 242 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 snoU13.20-201ENST00000459180 104 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 RPL23AP2-201ENST00000471227 466 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 AC008897.1-201ENST00000494006 347 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 RNF138P1-201ENST00000502765 546 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 AC008427.1-201ENST00000503102 655 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 AC069306.1-201ENST00000507006 843 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 VWA8P1-201ENST00000510889 176 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 RNU6-885P-201ENST00000516607 104 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.14□□□□□ -1.75
SCN1BQ07699 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.14□□□□□ -1.75
SCN1BQ07699 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.14□□□□□ -1.75
SCN1BQ07699 OR6C73P-201ENST00000546432 358 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.14□□□□□ -1.75
SCN1BQ07699 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.14□□□□□ -1.75
SCN1BQ07699 TVP23CP2-201ENST00000571473 623 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.14□□□□□ -1.75
SCN1BQ07699 OR4G1P-201ENST00000588632 938 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
SCN1BQ07699 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.14□□□□□ -1.75
SCN1BQ07699 AP005137.2-201ENST00000609238 400 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 RMST_9.1-201ENST00000619945 193 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.14□□□□□ -1.75
SCN1BQ07699 MIR4727-201ENST00000622232 55 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.14□□□□□ -1.75
SCN1BQ07699 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.14□□□□□ -1.75
SCN1BQ07699 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.14□□□□□ -1.75
SCN1BQ07699 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.14□□□□□ -1.75
SCN1BQ07699 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.14□□□□□ -1.75
SCN1BQ07699 PABPC1P7-201ENST00000413177 1513 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 MTCO1P11-201ENST00000429111 1528 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.14□□□□□ -1.75
SCN1BQ07699 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SCN1BQ07699 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SCN1BQ07699 SAGE4P-201ENST00000442271 3381 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.14□□□□□ -1.75
SCN1BQ07699 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
SCN1BQ07699 PNPT1P2-201ENST00000456768 2050 ntBASIC4.14□□□□□ -1.75
SCN1BQ07699 AL136164.3-201ENST00000624429 3978 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.13□□□□□ -1.75
SCN1BQ07699 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
SCN1BQ07699 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SCN1BQ07699 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SCN1BQ07699 EFCAB3-201ENST00000305286 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SCN1BQ07699 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SCN1BQ07699 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SCN1BQ07699 AC067945.1-201ENST00000342609 618 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 RNA5SP22-201ENST00000365393 109 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
SCN1BQ07699 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.13□□□□□ -1.75
SCN1BQ07699 AL357515.1-201ENST00000402967 542 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 AL355143.1-201ENST00000407101 841 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 TBCAP2-201ENST00000416175 326 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.13□□□□□ -1.75
SCN1BQ07699 CENPIP1-201ENST00000425713 902 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 AC092634.2-201ENST00000428146 1010 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 IFNNP1-201ENST00000429219 553 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SCN1BQ07699 PPIAP17-201ENST00000438507 471 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 AC092647.3-201ENST00000443044 633 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 RPS20P32-201ENST00000456044 356 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 RN7SL222P-201ENST00000476452 299 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.13□□□□□ -1.75
SCN1BQ07699 SUMO2P5-201ENST00000506790 245 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.13□□□□□ -1.75
SCN1BQ07699 AC008837.1-201ENST00000511513 412 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 AC007016.1-201ENST00000512110 244 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 AC004980.4-201ENST00000513375 203 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 HNRNPKP5-201ENST00000515300 253 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 AC104057.1-201ENST00000515547 497 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 RNA5SP446-201ENST00000515955 82 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 RNA5SP497-201ENST00000516081 97 ntBASIC4.13□□□□□ -1.75
SCN1BQ07699 RNA5SP43-201ENST00000516559 110 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms