Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 RNU1-87P-201ENST00000363727 170 ntBASIC3.5□□□□□ -1.85
H3F3AP84243 RN7SKP227-201ENST00000364445 330 ntBASIC3.5□□□□□ -1.85
H3F3AP84243 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
H3F3AP84243 MIR199A2-201ENST00000385289 110 ntBASIC3.5□□□□□ -1.85
H3F3AP84243 MIR1183-201ENST00000408856 89 ntBASIC3.5□□□□□ -1.85
H3F3AP84243 RHEBP3-201ENST00000411920 351 ntBASIC3.5□□□□□ -1.85
H3F3AP84243 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.5□□□□□ -1.85
H3F3AP84243 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.5□□□□□ -1.85
H3F3AP84243 Z97055.1-201ENST00000419730 712 ntBASIC3.5□□□□□ -1.85
H3F3AP84243 AC048351.1-201ENST00000420064 602 ntBASIC3.5□□□□□ -1.85
H3F3AP84243 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC3.5□□□□□ -1.85
H3F3AP84243 AC096638.2-201ENST00000434965 711 ntBASIC3.5□□□□□ -1.85
H3F3AP84243 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.5□□□□□ -1.85
H3F3AP84243 RPL21P11-201ENST00000461458 483 ntBASIC3.5□□□□□ -1.85
H3F3AP84243 NIPA2P2-201ENST00000496376 1083 ntBASIC3.5□□□□□ -1.85
H3F3AP84243 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC3.5□□□□□ -1.85
H3F3AP84243 NPM1P52-201ENST00000518264 846 ntBASIC3.5□□□□□ -1.85
H3F3AP84243 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
H3F3AP84243 AC091515.1-201ENST00000548110 679 ntBASIC3.5□□□□□ -1.85
H3F3AP84243 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.5□□□□□ -1.85
H3F3AP84243 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.5□□□□□ -1.85
H3F3AP84243 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.5□□□□□ -1.85
H3F3AP84243 AC067959.1-201ENST00000604334 379 ntBASIC3.5□□□□□ -1.85
H3F3AP84243 AL592436.1-201ENST00000605135 558 ntBASIC3.5□□□□□ -1.85
H3F3AP84243 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.5□□□□□ -1.85
H3F3AP84243 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.5□□□□□ -1.85
H3F3AP84243 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC3.5□□□□□ -1.85
H3F3AP84243 MIR6500-201ENST00000622700 86 ntBASIC3.5□□□□□ -1.85
H3F3AP84243 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.5□□□□□ -1.85
H3F3AP84243 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
H3F3AP84243 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
H3F3AP84243 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
H3F3AP84243 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
H3F3AP84243 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC3.5□□□□□ -1.85
H3F3AP84243 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.5□□□□□ -1.85
H3F3AP84243 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.5□□□□□ -1.85
H3F3AP84243 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
H3F3AP84243 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
H3F3AP84243 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.49□□□□□ -1.85
H3F3AP84243 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
H3F3AP84243 RNU6-697P-201ENST00000363348 107 ntBASIC3.49□□□□□ -1.85
H3F3AP84243 RNA5SP515-201ENST00000364570 118 ntBASIC3.49□□□□□ -1.85
H3F3AP84243 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
H3F3AP84243 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.49□□□□□ -1.85
H3F3AP84243 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC3.49□□□□□ -1.85
H3F3AP84243 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.49□□□□□ -1.85
H3F3AP84243 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.49□□□□□ -1.85
H3F3AP84243 AL356535.1-201ENST00000440335 398 ntBASIC3.49□□□□□ -1.85
H3F3AP84243 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.49□□□□□ -1.85
H3F3AP84243 RPS4XP15-201ENST00000489210 795 ntBASIC3.49□□□□□ -1.85
H3F3AP84243 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.49□□□□□ -1.85
H3F3AP84243 AC010627.1-201ENST00000503819 1294 ntBASIC3.49□□□□□ -1.85
H3F3AP84243 AC109458.1-201ENST00000508858 316 ntBASIC3.49□□□□□ -1.85
H3F3AP84243 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC3.49□□□□□ -1.85
H3F3AP84243 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.49□□□□□ -1.85
H3F3AP84243 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.49□□□□□ -1.85
H3F3AP84243 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC3.49□□□□□ -1.85
H3F3AP84243 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC3.49□□□□□ -1.85
H3F3AP84243 TOMM20P2-201ENST00000540082 421 ntBASIC3.49□□□□□ -1.85
H3F3AP84243 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.49□□□□□ -1.85
H3F3AP84243 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.49□□□□□ -1.85
H3F3AP84243 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.49□□□□□ -1.85
H3F3AP84243 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.49□□□□□ -1.85
H3F3AP84243 AC053481.4-201ENST00000583164 216 ntBASIC3.49□□□□□ -1.85
H3F3AP84243 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
H3F3AP84243 VN1R84P-201ENST00000593697 235 ntBASIC3.49□□□□□ -1.85
H3F3AP84243 AC034236.3-201ENST00000605999 461 ntBASIC3.49□□□□□ -1.85
H3F3AP84243 AP003392.5-201ENST00000607857 415 ntBASIC3.49□□□□□ -1.85
H3F3AP84243 MIR486-1-201ENST00000612171 68 ntBASIC3.49□□□□□ -1.85
H3F3AP84243 uc_338.32-201ENST00000615087 172 ntBASIC3.49□□□□□ -1.85
H3F3AP84243 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.49□□□□□ -1.85
H3F3AP84243 RFC1-217ENST00000639695 867 ntTSL 5 BASIC3.49□□□□□ -1.85
H3F3AP84243 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.49□□□□□ -1.85
H3F3AP84243 AC026951.1-201ENST00000559530 2459 ntBASIC3.49□□□□□ -1.85
H3F3AP84243 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
H3F3AP84243 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
H3F3AP84243 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
H3F3AP84243 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.49□□□□□ -1.85
H3F3AP84243 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
H3F3AP84243 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
H3F3AP84243 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
H3F3AP84243 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
H3F3AP84243 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
H3F3AP84243 MFSD8-220ENST00000641243 1422 ntBASIC3.48□□□□□ -1.85
H3F3AP84243 AC008725.1-201ENST00000605123 2263 ntBASIC3.48□□□□□ -1.85
H3F3AP84243 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
H3F3AP84243 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC3.48□□□□□ -1.85
H3F3AP84243 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC3.48□□□□□ -1.85
H3F3AP84243 RPL7P53-201ENST00000421245 739 ntBASIC3.48□□□□□ -1.85
H3F3AP84243 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
H3F3AP84243 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.48□□□□□ -1.85
H3F3AP84243 RPS17P13-201ENST00000448974 407 ntBASIC3.48□□□□□ -1.85
H3F3AP84243 AC068587.1-201ENST00000483613 781 ntBASIC3.48□□□□□ -1.85
H3F3AP84243 AC092045.1-201ENST00000495716 1231 ntBASIC3.48□□□□□ -1.85
H3F3AP84243 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC3.48□□□□□ -1.85
H3F3AP84243 AC010460.1-201ENST00000507087 466 ntBASIC3.48□□□□□ -1.85
H3F3AP84243 AC008802.1-201ENST00000519121 791 ntBASIC3.48□□□□□ -1.85
H3F3AP84243 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
H3F3AP84243 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.48□□□□□ -1.85
H3F3AP84243 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms