Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RNU4-51P-201ENST00000364206 140 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RHBDL3P58872 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC5.53□□□□□ -1.52
RHBDL3P58872 RNA5SP187-201ENST00000384400 119 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 AL079342.2-201ENST00000403367 482 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 RNU2-21P-201ENST00000410368 188 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 TMBIM7P-201ENST00000418074 855 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 AC106883.1-201ENST00000418805 562 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 TEX41-203ENST00000420472 765 ntTSL 3 BASIC5.53□□□□□ -1.52
RHBDL3P58872 RPF2P1-201ENST00000424137 906 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 AL031313.1-201ENST00000448435 256 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 AC104306.1-201ENST00000449702 371 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 AL672167.3-201ENST00000465951 960 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 AC104763.1-201ENST00000475274 360 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.53□□□□□ -1.52
RHBDL3P58872 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.53□□□□□ -1.52
RHBDL3P58872 RN7SKP122-201ENST00000515923 296 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 SNORA19.3-201ENST00000516165 130 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.53□□□□□ -1.52
RHBDL3P58872 AP001317.1-201ENST00000531194 960 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.53□□□□□ -1.52
RHBDL3P58872 CYCSP40-201ENST00000575927 294 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC5.53□□□□□ -1.52
RHBDL3P58872 BNIP3P40-201ENST00000596017 556 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 AL354760.1-201ENST00000608357 643 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 AC005962.2-201ENST00000611427 652 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.53□□□□□ -1.52
RHBDL3P58872 AC123767.1-202ENST00000620407 817 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 AL512506.2-201ENST00000624472 458 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 ZNF663P-202ENST00000641770 1131 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 OR52H1-202ENST00000641796 1061 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDL3P58872 AC135352.1-201ENST00000506173 1418 ntBASIC5.53□□□□□ -1.52
RHBDL3P58872 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDL3P58872 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
RHBDL3P58872 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDL3P58872 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDL3P58872 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC5.53□□□□□ -1.52
RHBDL3P58872 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
RHBDL3P58872 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDL3P58872 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RHBDL3P58872 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RHBDL3P58872 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
RHBDL3P58872 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RHBDL3P58872 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RHBDL3P58872 API5-210ENST00000534600 1760 ntTSL 5 BASIC5.52□□□□□ -1.53
RHBDL3P58872 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.52□□□□□ -1.53
RHBDL3P58872 HSP90AA5P-201ENST00000438353 2192 ntBASIC5.52□□□□□ -1.53
RHBDL3P58872 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RHBDL3P58872 CASC19-206ENST00000641028 1430 ntBASIC5.52□□□□□ -1.53
RHBDL3P58872 RNU6-839P-201ENST00000363347 108 ntBASIC5.52□□□□□ -1.53
RHBDL3P58872 RNU6-115P-201ENST00000364310 107 ntBASIC5.52□□□□□ -1.53
RHBDL3P58872 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RHBDL3P58872 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.52□□□□□ -1.53
RHBDL3P58872 ATP5F1P2-201ENST00000398143 760 ntBASIC5.52□□□□□ -1.53
RHBDL3P58872 RPS3AP9-201ENST00000417027 792 ntBASIC5.52□□□□□ -1.53
RHBDL3P58872 EIF4HP2-201ENST00000424380 563 ntBASIC5.52□□□□□ -1.53
RHBDL3P58872 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.52□□□□□ -1.53
RHBDL3P58872 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.52□□□□□ -1.53
RHBDL3P58872 AC103987.1-201ENST00000473394 348 ntBASIC5.52□□□□□ -1.53
RHBDL3P58872 AC087879.1-201ENST00000474343 374 ntBASIC5.52□□□□□ -1.53
RHBDL3P58872 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.52□□□□□ -1.53
RHBDL3P58872 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC5.52□□□□□ -1.53
RHBDL3P58872 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.52□□□□□ -1.53
RHBDL3P58872 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.52□□□□□ -1.53
RHBDL3P58872 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC5.52□□□□□ -1.53
RHBDL3P58872 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RHBDL3P58872 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC5.52□□□□□ -1.53
RHBDL3P58872 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RHBDL3P58872 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.52□□□□□ -1.53
RHBDL3P58872 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.52□□□□□ -1.53
RHBDL3P58872 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.52□□□□□ -1.53
RHBDL3P58872 AC087477.6-201ENST00000559595 843 ntBASIC5.52□□□□□ -1.53
RHBDL3P58872 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC5.52□□□□□ -1.53
RHBDL3P58872 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC5.52□□□□□ -1.53
RHBDL3P58872 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.52□□□□□ -1.53
RHBDL3P58872 AC091057.3-201ENST00000602684 733 ntBASIC5.52□□□□□ -1.53
RHBDL3P58872 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC5.52□□□□□ -1.53
RHBDL3P58872 OR6R2P-201ENST00000609216 300 ntBASIC5.52□□□□□ -1.53
RHBDL3P58872 AC105429.2-201ENST00000610567 517 ntBASIC5.52□□□□□ -1.53
RHBDL3P58872 AL133243.1-201ENST00000614487 366 ntBASIC5.52□□□□□ -1.53
RHBDL3P58872 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.52□□□□□ -1.53
RHBDL3P58872 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.52□□□□□ -1.53
RHBDL3P58872 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RHBDL3P58872 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
RHBDL3P58872 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RHBDL3P58872 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.52□□□□□ -1.53
RHBDL3P58872 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
RHBDL3P58872 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.51□□□□□ -1.53
RHBDL3P58872 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RHBDL3P58872 AC108751.5-201ENST00000492880 1336 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC5.51□□□□□ -1.53
RHBDL3P58872 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RHBDL3P58872 OR51H2P-202ENST00000641424 3046 ntBASIC5.51□□□□□ -1.53
RHBDL3P58872 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.51□□□□□ -1.53
RHBDL3P58872 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.51□□□□□ -1.53
RHBDL3P58872 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.51□□□□□ -1.53
RHBDL3P58872 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.51□□□□□ -1.53
RHBDL3P58872 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms