Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN12P56749 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLDN12P56749 AL391261.4-201ENST00000616012 481 ntBASIC3.4□□□□□ -1.87
CLDN12P56749 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.4□□□□□ -1.87
CLDN12P56749 MIR7703-201ENST00000620784 77 ntBASIC3.4□□□□□ -1.87
CLDN12P56749 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
CLDN12P56749 OR5BE1P-202ENST00000641168 1176 ntBASIC3.4□□□□□ -1.87
CLDN12P56749 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLDN12P56749 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.4□□□□□ -1.87
CLDN12P56749 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.4□□□□□ -1.87
CLDN12P56749 AC066616.2-201ENST00000559334 1481 ntBASIC3.4□□□□□ -1.87
CLDN12P56749 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLDN12P56749 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN12P56749 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CLDN12P56749 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN12P56749 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN12P56749 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN12P56749 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN12P56749 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN12P56749 AC079741.1-201ENST00000321498 212 ntBASIC3.39□□□□□ -1.87
CLDN12P56749 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CLDN12P56749 SNORA60-201ENST00000362396 134 ntBASIC3.39□□□□□ -1.87
CLDN12P56749 RNA5SP399-201ENST00000364003 117 ntBASIC3.39□□□□□ -1.87
CLDN12P56749 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN12P56749 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN12P56749 AL161909.1-201ENST00000397390 712 ntBASIC3.39□□□□□ -1.87
CLDN12P56749 HLFP1-201ENST00000402375 499 ntBASIC3.39□□□□□ -1.87
CLDN12P56749 TANK-203ENST00000402568 878 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN12P56749 HSPE1P12-201ENST00000412576 301 ntBASIC3.39□□□□□ -1.87
CLDN12P56749 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.39□□□□□ -1.87
CLDN12P56749 HIGD1AP4-201ENST00000430194 280 ntBASIC3.39□□□□□ -1.87
CLDN12P56749 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.39□□□□□ -1.87
CLDN12P56749 MTCYBP21-201ENST00000443300 1113 ntBASIC3.39□□□□□ -1.87
CLDN12P56749 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN12P56749 MTCO3P16-201ENST00000454456 754 ntBASIC3.39□□□□□ -1.87
CLDN12P56749 TVP23BP2-201ENST00000455082 615 ntBASIC3.39□□□□□ -1.87
CLDN12P56749 DNAJC19P1-201ENST00000455312 319 ntBASIC3.39□□□□□ -1.87
CLDN12P56749 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CLDN12P56749 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN12P56749 AK3P4-201ENST00000504283 583 ntBASIC3.39□□□□□ -1.87
CLDN12P56749 IGBP1P5-201ENST00000507524 1000 ntBASIC3.39□□□□□ -1.87
CLDN12P56749 AC021146.7-201ENST00000509604 775 ntBASIC3.39□□□□□ -1.87
CLDN12P56749 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.39□□□□□ -1.87
CLDN12P56749 AC010285.3-201ENST00000511668 676 ntBASIC3.39□□□□□ -1.87
CLDN12P56749 AC090877.1-201ENST00000561418 344 ntBASIC3.39□□□□□ -1.87
CLDN12P56749 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.39□□□□□ -1.87
CLDN12P56749 AL049634.3-201ENST00000604968 457 ntBASIC3.39□□□□□ -1.87
CLDN12P56749 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN12P56749 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN12P56749 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN12P56749 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.39□□□□□ -1.87
CLDN12P56749 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
CLDN12P56749 DCAF13P1-201ENST00000495256 1330 ntBASIC3.39□□□□□ -1.87
CLDN12P56749 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN12P56749 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CLDN12P56749 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN12P56749 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN12P56749 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.38□□□□□ -1.87
CLDN12P56749 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
CLDN12P56749 EXOC5P1-201ENST00000510543 1969 ntBASIC3.38□□□□□ -1.87
CLDN12P56749 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN12P56749 ZNF33CP-201ENST00000432492 2030 ntBASIC3.38□□□□□ -1.87
CLDN12P56749 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN12P56749 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN12P56749 AL035419.1-201ENST00000397037 564 ntBASIC3.38□□□□□ -1.87
CLDN12P56749 RNU4-25P-201ENST00000410569 230 ntBASIC3.38□□□□□ -1.87
CLDN12P56749 RPL23AP26-201ENST00000412728 464 ntBASIC3.38□□□□□ -1.87
CLDN12P56749 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN12P56749 RPL21P109-201ENST00000422213 475 ntBASIC3.38□□□□□ -1.87
CLDN12P56749 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN12P56749 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN12P56749 CBX1P4-201ENST00000439415 457 ntBASIC3.38□□□□□ -1.87
CLDN12P56749 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN12P56749 AL513533.1-201ENST00000453728 415 ntBASIC3.38□□□□□ -1.87
CLDN12P56749 C1DP3-201ENST00000455013 423 ntBASIC3.38□□□□□ -1.87
CLDN12P56749 HMGN2P7-201ENST00000456186 273 ntBASIC3.38□□□□□ -1.87
CLDN12P56749 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN12P56749 HMGB3P30-201ENST00000457863 606 ntBASIC3.38□□□□□ -1.87
CLDN12P56749 RPL38P1-201ENST00000460914 211 ntBASIC3.38□□□□□ -1.87
CLDN12P56749 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN12P56749 AC041039.1-201ENST00000485656 536 ntBASIC3.38□□□□□ -1.87
CLDN12P56749 RN7SL604P-201ENST00000492589 296 ntBASIC3.38□□□□□ -1.87
CLDN12P56749 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN12P56749 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN12P56749 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN12P56749 RN7SKP83-201ENST00000516512 178 ntBASIC3.38□□□□□ -1.87
CLDN12P56749 RNU6-1231P-201ENST00000517185 103 ntBASIC3.38□□□□□ -1.87
CLDN12P56749 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.38□□□□□ -1.87
CLDN12P56749 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.38□□□□□ -1.87
CLDN12P56749 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN12P56749 AC069366.1-201ENST00000583159 838 ntBASIC3.38□□□□□ -1.87
CLDN12P56749 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN12P56749 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN12P56749 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN12P56749 AL390816.3-201ENST00000604527 1066 ntBASIC3.38□□□□□ -1.87
CLDN12P56749 AL021707.7-201ENST00000607991 416 ntBASIC3.38□□□□□ -1.87
CLDN12P56749 AC244205.2-202ENST00000635781 342 ntBASIC3.38□□□□□ -1.87
CLDN12P56749 TNPO1P3-201ENST00000436471 2662 ntBASIC3.38□□□□□ -1.87
CLDN12P56749 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN12P56749 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms