Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.19□□□□□ -1.74
CDH11P55287 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
CDH11P55287 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH11P55287 POMP-202ENST00000460403 1428 ntTSL 3 BASIC4.19□□□□□ -1.74
CDH11P55287 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.19□□□□□ -1.74
CDH11P55287 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH11P55287 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.19□□□□□ -1.74
CDH11P55287 MTND4P31-201ENST00000425607 1343 ntBASIC4.19□□□□□ -1.74
CDH11P55287 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CDH11P55287 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDH11P55287 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CDH11P55287 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDH11P55287 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDH11P55287 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDH11P55287 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CDH11P55287 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH11P55287 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH11P55287 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.18□□□□□ -1.74
CDH11P55287 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CDH11P55287 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDH11P55287 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CDH11P55287 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDH11P55287 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
CDH11P55287 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
CDH11P55287 AL590290.1-201ENST00000405336 380 ntBASIC4.18□□□□□ -1.74
CDH11P55287 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH11P55287 AL512430.2-201ENST00000406786 339 ntBASIC4.18□□□□□ -1.74
CDH11P55287 SNORA11C-201ENST00000408532 129 ntBASIC4.18□□□□□ -1.74
CDH11P55287 RNU6-77P-201ENST00000410554 91 ntBASIC4.18□□□□□ -1.74
CDH11P55287 ATG4AP1-201ENST00000416893 538 ntBASIC4.18□□□□□ -1.74
CDH11P55287 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC4.18□□□□□ -1.74
CDH11P55287 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.18□□□□□ -1.74
CDH11P55287 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH11P55287 MTATP6P17-201ENST00000431030 672 ntBASIC4.18□□□□□ -1.74
CDH11P55287 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.18□□□□□ -1.74
CDH11P55287 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDH11P55287 AC092809.1-201ENST00000441469 474 ntBASIC4.18□□□□□ -1.74
CDH11P55287 VN1R25P-201ENST00000443385 738 ntBASIC4.18□□□□□ -1.74
CDH11P55287 AC004022.1-201ENST00000447766 1066 ntBASIC4.18□□□□□ -1.74
CDH11P55287 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH11P55287 MTND2P8-201ENST00000450555 1025 ntBASIC4.18□□□□□ -1.74
CDH11P55287 AC079168.2-201ENST00000453977 416 ntBASIC4.18□□□□□ -1.74
CDH11P55287 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH11P55287 AL139824.2-201ENST00000458731 1095 ntBASIC4.18□□□□□ -1.74
CDH11P55287 RNU6-1218P-201ENST00000458990 108 ntBASIC4.18□□□□□ -1.74
CDH11P55287 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH11P55287 RN7SL354P-201ENST00000469282 294 ntBASIC4.18□□□□□ -1.74
CDH11P55287 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
CDH11P55287 AC114322.1-201ENST00000506771 926 ntBASIC4.18□□□□□ -1.74
CDH11P55287 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
CDH11P55287 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH11P55287 AC091868.1-201ENST00000508746 304 ntBASIC4.18□□□□□ -1.74
CDH11P55287 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDH11P55287 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH11P55287 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH11P55287 RNU6-311P-201ENST00000516224 102 ntBASIC4.18□□□□□ -1.74
CDH11P55287 RNU6-416P-201ENST00000516265 103 ntBASIC4.18□□□□□ -1.74
CDH11P55287 AC026407.1-201ENST00000518369 204 ntBASIC4.18□□□□□ -1.74
CDH11P55287 HMGB1P23-201ENST00000518743 568 ntBASIC4.18□□□□□ -1.74
CDH11P55287 AC090151.1-201ENST00000520784 730 ntBASIC4.18□□□□□ -1.74
CDH11P55287 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH11P55287 HMGB1P1-201ENST00000522557 636 ntBASIC4.18□□□□□ -1.74
CDH11P55287 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH11P55287 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH11P55287 MTCO3P15-201ENST00000526563 574 ntBASIC4.18□□□□□ -1.74
CDH11P55287 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH11P55287 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH11P55287 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH11P55287 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.18□□□□□ -1.74
CDH11P55287 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDH11P55287 CYP2C60P-201ENST00000566088 139 ntBASIC4.18□□□□□ -1.74
CDH11P55287 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH11P55287 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH11P55287 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.18□□□□□ -1.74
CDH11P55287 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
CDH11P55287 AC008759.1-201ENST00000589783 983 ntBASIC4.18□□□□□ -1.74
CDH11P55287 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH11P55287 CCDC58P3-201ENST00000590792 430 ntBASIC4.18□□□□□ -1.74
CDH11P55287 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH11P55287 VN1R88P-201ENST00000596787 292 ntBASIC4.18□□□□□ -1.74
CDH11P55287 AC009237.15-201ENST00000610252 501 ntBASIC4.18□□□□□ -1.74
CDH11P55287 AC023509.5-201ENST00000617434 807 ntBASIC4.18□□□□□ -1.74
CDH11P55287 AC139769.3-201ENST00000618383 175 ntBASIC4.18□□□□□ -1.74
CDH11P55287 MIR6853-201ENST00000619642 74 ntBASIC4.18□□□□□ -1.74
CDH11P55287 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDH11P55287 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.18□□□□□ -1.74
CDH11P55287 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDH11P55287 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
CDH11P55287 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.18□□□□□ -1.74
CDH11P55287 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
CDH11P55287 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH11P55287 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC4.18□□□□□ -1.74
CDH11P55287 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CDH11P55287 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.18□□□□□ -1.74
CDH11P55287 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDH11P55287 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDH11P55287 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.17□□□□□ -1.74
CDH11P55287 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CDH11P55287 AC096656.1-201ENST00000623826 1364 ntBASIC4.17□□□□□ -1.74
CDH11P55287 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 154.2 ms