Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 RNU6-941P-201ENST00000516346 108 ntBASIC5.72□□□□□ -1.49
EPHB3P54753 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.72□□□□□ -1.49
EPHB3P54753 OR4C2P-201ENST00000530855 1064 ntBASIC5.72□□□□□ -1.49
EPHB3P54753 AC122688.1-201ENST00000541494 223 ntBASIC5.72□□□□□ -1.49
EPHB3P54753 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.72□□□□□ -1.49
EPHB3P54753 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.72□□□□□ -1.49
EPHB3P54753 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC5.72□□□□□ -1.49
EPHB3P54753 NIFKP8-201ENST00000560500 874 ntBASIC5.72□□□□□ -1.49
EPHB3P54753 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.72□□□□□ -1.49
EPHB3P54753 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.72□□□□□ -1.49
EPHB3P54753 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC5.72□□□□□ -1.49
EPHB3P54753 AC008752.3-201ENST00000588113 712 ntBASIC5.72□□□□□ -1.49
EPHB3P54753 AC060780.2-201ENST00000589047 198 ntBASIC5.72□□□□□ -1.49
EPHB3P54753 AC068020.1-201ENST00000594215 661 ntBASIC5.72□□□□□ -1.49
EPHB3P54753 AC069307.1-201ENST00000602820 447 ntBASIC5.72□□□□□ -1.49
EPHB3P54753 AC130352.1-201ENST00000602979 661 ntBASIC5.72□□□□□ -1.49
EPHB3P54753 AC118658.2-201ENST00000618697 459 ntBASIC5.72□□□□□ -1.49
EPHB3P54753 AC011815.3-201ENST00000624194 473 ntBASIC5.72□□□□□ -1.49
EPHB3P54753 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.72□□□□□ -1.49
EPHB3P54753 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.72□□□□□ -1.49
EPHB3P54753 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
EPHB3P54753 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
EPHB3P54753 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
EPHB3P54753 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
EPHB3P54753 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
EPHB3P54753 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
EPHB3P54753 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
EPHB3P54753 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
EPHB3P54753 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
EPHB3P54753 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
EPHB3P54753 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
EPHB3P54753 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
EPHB3P54753 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
EPHB3P54753 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
EPHB3P54753 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
EPHB3P54753 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC5.71□□□□□ -1.5
EPHB3P54753 RNU1-43P-201ENST00000365052 165 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 RN7SKP186-201ENST00000365371 303 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
EPHB3P54753 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.71□□□□□ -1.5
EPHB3P54753 Y_RNA.402-201ENST00000383972 102 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 RNU6-297P-201ENST00000384636 107 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 MIR765-201ENST00000390226 114 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
EPHB3P54753 RPS3AP23-201ENST00000401762 784 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 RPSAP35-201ENST00000413753 818 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 C1DP2-201ENST00000418167 426 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 AL121878.1-201ENST00000418638 859 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 AL513174.1-201ENST00000423182 629 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.71□□□□□ -1.5
EPHB3P54753 NPM1P22-201ENST00000427761 952 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 CLUHP1-201ENST00000435012 1190 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 AC244505.5-201ENST00000443639 207 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 CEACAMP7-201ENST00000444105 496 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC5.71□□□□□ -1.5
EPHB3P54753 GAPDHP25-201ENST00000447061 1001 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 SBDSP1-204ENST00000453858 737 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 BX322784.1-201ENST00000455793 1077 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 SNORD125-201ENST00000459538 96 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.71□□□□□ -1.5
EPHB3P54753 HMGN1P12-201ENST00000499125 195 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 RNU6-1225P-201ENST00000516336 65 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.71□□□□□ -1.5
EPHB3P54753 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC5.71□□□□□ -1.5
EPHB3P54753 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC5.71□□□□□ -1.5
EPHB3P54753 PSMB7P1-201ENST00000556349 514 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.71□□□□□ -1.5
EPHB3P54753 RPL10P14-201ENST00000565265 298 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 MIR4433B-201ENST00000581329 102 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.71□□□□□ -1.5
EPHB3P54753 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC5.71□□□□□ -1.5
EPHB3P54753 AC011453.2-201ENST00000603737 729 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 BNIP3P11-201ENST00000603878 563 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 AL162730.1-201ENST00000605734 292 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 AP004607.9-201ENST00000618202 316 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 AC010338.1-201ENST00000621823 717 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 AP000550.3-201ENST00000637734 379 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.71□□□□□ -1.5
EPHB3P54753 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
EPHB3P54753 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.71□□□□□ -1.5
EPHB3P54753 NSRP1P1-201ENST00000444067 1693 ntBASIC5.71□□□□□ -1.5
EPHB3P54753 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
EPHB3P54753 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.71□□□□□ -1.5
EPHB3P54753 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.7□□□□□ -1.5
EPHB3P54753 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
EPHB3P54753 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
EPHB3P54753 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC5.7□□□□□ -1.5
EPHB3P54753 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
EPHB3P54753 ENSAP3-201ENST00000312710 333 ntBASIC5.7□□□□□ -1.5
EPHB3P54753 RNU6-543P-201ENST00000362576 108 ntBASIC5.7□□□□□ -1.5
EPHB3P54753 U8.4-201ENST00000363626 134 ntBASIC5.7□□□□□ -1.5
EPHB3P54753 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
EPHB3P54753 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.7□□□□□ -1.5
EPHB3P54753 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC5.7□□□□□ -1.5
EPHB3P54753 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.7□□□□□ -1.5
EPHB3P54753 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.7□□□□□ -1.5
EPHB3P54753 ZYG11AP1-201ENST00000430329 837 ntBASIC5.7□□□□□ -1.5
EPHB3P54753 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC5.7□□□□□ -1.5
EPHB3P54753 NDUFA5P4-201ENST00000436704 385 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms