Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 AC010401.1-201ENST00000463867 348 ntBASIC3.41□□□□□ -1.86
POLR2JP52435 AC006511.1-201ENST00000470614 315 ntBASIC3.41□□□□□ -1.86
POLR2JP52435 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.41□□□□□ -1.86
POLR2JP52435 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.41□□□□□ -1.86
POLR2JP52435 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC3.41□□□□□ -1.86
POLR2JP52435 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC3.41□□□□□ -1.86
POLR2JP52435 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.41□□□□□ -1.86
POLR2JP52435 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC3.41□□□□□ -1.86
POLR2JP52435 AC087499.8-201ENST00000578406 226 ntBASIC3.41□□□□□ -1.86
POLR2JP52435 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
POLR2JP52435 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.41□□□□□ -1.86
POLR2JP52435 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
POLR2JP52435 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
POLR2JP52435 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
POLR2JP52435 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.41□□□□□ -1.86
POLR2JP52435 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.41□□□□□ -1.86
POLR2JP52435 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.41□□□□□ -1.86
POLR2JP52435 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
POLR2JP52435 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
POLR2JP52435 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
POLR2JP52435 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
POLR2JP52435 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.4□□□□□ -1.86
POLR2JP52435 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
POLR2JP52435 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
POLR2JP52435 AC134882.1-201ENST00000603738 1676 ntBASIC3.4□□□□□ -1.86
POLR2JP52435 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
POLR2JP52435 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
POLR2JP52435 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.4□□□□□ -1.87
POLR2JP52435 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
POLR2JP52435 AP002088.1-201ENST00000382740 395 ntBASIC3.4□□□□□ -1.87
POLR2JP52435 RPL7P60-201ENST00000397636 735 ntBASIC3.4□□□□□ -1.87
POLR2JP52435 AL590704.1-201ENST00000402856 794 ntBASIC3.4□□□□□ -1.87
POLR2JP52435 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
POLR2JP52435 LIPT1P1-201ENST00000415870 1186 ntBASIC3.4□□□□□ -1.87
POLR2JP52435 AC096644.3-201ENST00000416788 338 ntBASIC3.4□□□□□ -1.87
POLR2JP52435 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
POLR2JP52435 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.4□□□□□ -1.87
POLR2JP52435 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
POLR2JP52435 AL357552.1-201ENST00000445254 415 ntBASIC3.4□□□□□ -1.87
POLR2JP52435 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
POLR2JP52435 NDUFS5P3-201ENST00000450668 321 ntBASIC3.4□□□□□ -1.87
POLR2JP52435 RPL12P26-201ENST00000452430 487 ntBASIC3.4□□□□□ -1.87
POLR2JP52435 AC006539.3-201ENST00000454258 129 ntBASIC3.4□□□□□ -1.87
POLR2JP52435 AC087312.1-201ENST00000471411 480 ntBASIC3.4□□□□□ -1.87
POLR2JP52435 AP000563.1-201ENST00000490865 758 ntBASIC3.4□□□□□ -1.87
POLR2JP52435 AL139099.1-201ENST00000497398 403 ntBASIC3.4□□□□□ -1.87
POLR2JP52435 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC3.4□□□□□ -1.87
POLR2JP52435 AC010460.1-201ENST00000507087 466 ntBASIC3.4□□□□□ -1.87
POLR2JP52435 AC110768.1-201ENST00000509222 400 ntBASIC3.4□□□□□ -1.87
POLR2JP52435 RNA5SP228-201ENST00000516232 133 ntBASIC3.4□□□□□ -1.87
POLR2JP52435 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.4□□□□□ -1.87
POLR2JP52435 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.4□□□□□ -1.87
POLR2JP52435 AC009101.1-201ENST00000568135 242 ntBASIC3.4□□□□□ -1.87
POLR2JP52435 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.4□□□□□ -1.87
POLR2JP52435 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.4□□□□□ -1.87
POLR2JP52435 AL357559.1-201ENST00000622228 274 ntBASIC3.4□□□□□ -1.87
POLR2JP52435 AL354798.1-201ENST00000622505 329 ntBASIC3.4□□□□□ -1.87
POLR2JP52435 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.4□□□□□ -1.87
POLR2JP52435 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
POLR2JP52435 AC007390.2-201ENST00000606229 3803 ntBASIC3.39□□□□□ -1.87
POLR2JP52435 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC3.39□□□□□ -1.87
POLR2JP52435 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
POLR2JP52435 PNPT1P2-201ENST00000456768 2050 ntBASIC3.39□□□□□ -1.87
POLR2JP52435 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC3.39□□□□□ -1.87
POLR2JP52435 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
POLR2JP52435 AC007685.1-201ENST00000329806 452 ntBASIC3.39□□□□□ -1.87
POLR2JP52435 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
POLR2JP52435 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
POLR2JP52435 AC007068.1-201ENST00000396690 844 ntBASIC3.39□□□□□ -1.87
POLR2JP52435 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.39□□□□□ -1.87
POLR2JP52435 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.39□□□□□ -1.87
POLR2JP52435 OR4F13P-201ENST00000428478 931 ntBASIC3.39□□□□□ -1.87
POLR2JP52435 HSPE1P27-201ENST00000430808 296 ntBASIC3.39□□□□□ -1.87
POLR2JP52435 AC016712.1-201ENST00000431088 378 ntBASIC3.39□□□□□ -1.87
POLR2JP52435 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.39□□□□□ -1.87
POLR2JP52435 BMS1P19-201ENST00000433925 393 ntBASIC3.39□□□□□ -1.87
POLR2JP52435 RPL10P17-201ENST00000453852 316 ntBASIC3.39□□□□□ -1.87
POLR2JP52435 AL133162.1-201ENST00000463228 453 ntBASIC3.39□□□□□ -1.87
POLR2JP52435 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
POLR2JP52435 RN7SL594P-201ENST00000470590 287 ntBASIC3.39□□□□□ -1.87
POLR2JP52435 RPS4XP22-201ENST00000480755 780 ntBASIC3.39□□□□□ -1.87
POLR2JP52435 SETP14-201ENST00000497538 873 ntBASIC3.39□□□□□ -1.87
POLR2JP52435 RN7SKP122-201ENST00000515923 296 ntBASIC3.39□□□□□ -1.87
POLR2JP52435 VTA1P2-201ENST00000520205 911 ntBASIC3.39□□□□□ -1.87
POLR2JP52435 AC090819.1-201ENST00000523800 1111 ntBASIC3.39□□□□□ -1.87
POLR2JP52435 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.39□□□□□ -1.87
POLR2JP52435 AP001636.2-201ENST00000525517 696 ntBASIC3.39□□□□□ -1.87
POLR2JP52435 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.39□□□□□ -1.87
POLR2JP52435 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.39□□□□□ -1.87
POLR2JP52435 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
POLR2JP52435 RFPL1S-203ENST00000539579 330 ntBASIC3.39□□□□□ -1.87
POLR2JP52435 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC3.39□□□□□ -1.87
POLR2JP52435 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.39□□□□□ -1.87
POLR2JP52435 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.39□□□□□ -1.87
POLR2JP52435 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.39□□□□□ -1.87
POLR2JP52435 AC106785.3-201ENST00000564064 847 ntBASIC3.39□□□□□ -1.87
POLR2JP52435 AC010435.1-201ENST00000623353 1177 ntBASIC3.39□□□□□ -1.87
POLR2JP52435 AC110801.1-201ENST00000623590 212 ntBASIC3.39□□□□□ -1.87
POLR2JP52435 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
POLR2JP52435 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms