Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CLCNKAP51800 AC111188.2-201ENST00000529697 1387 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.53□□□□□ -1.68
CLCNKAP51800 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLCNKAP51800 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLCNKAP51800 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
CLCNKAP51800 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLCNKAP51800 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLCNKAP51800 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLCNKAP51800 ANKRD36P1-201ENST00000344424 659 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.53□□□□□ -1.68
CLCNKAP51800 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.53□□□□□ -1.68
CLCNKAP51800 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CLCNKAP51800 GLULP6-201ENST00000399502 913 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 Y_RNA.625-201ENST00000411256 107 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC4.53□□□□□ -1.68
CLCNKAP51800 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.53□□□□□ -1.68
CLCNKAP51800 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.53□□□□□ -1.68
CLCNKAP51800 AC005005.2-201ENST00000420779 380 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 UQCRBP1-201ENST00000421129 336 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 NPM1P24-201ENST00000428039 894 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 CNOT7P1-201ENST00000429006 852 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.53□□□□□ -1.68
CLCNKAP51800 AC068287.1-201ENST00000430283 295 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CLCNKAP51800 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.53□□□□□ -1.68
CLCNKAP51800 ATP6V0E1P2-201ENST00000441771 245 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 AC073587.1-201ENST00000447093 876 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 AC005002.1-201ENST00000447458 540 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 CDC42P1-201ENST00000456658 548 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 snoU13.1-201ENST00000459157 104 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 AC112206.1-201ENST00000468416 477 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.53□□□□□ -1.68
CLCNKAP51800 AC111193.1-201ENST00000504097 155 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC4.53□□□□□ -1.68
CLCNKAP51800 AC008565.1-201ENST00000509046 885 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC4.53□□□□□ -1.68
CLCNKAP51800 PRELID3BP4-201ENST00000515476 571 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 IGKV2D-10-201ENST00000520194 281 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 DUXAP5-201ENST00000529668 529 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC4.53□□□□□ -1.68
CLCNKAP51800 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.53□□□□□ -1.68
CLCNKAP51800 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.53□□□□□ -1.68
CLCNKAP51800 RN7SL176P-201ENST00000580352 264 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 AC069061.3-201ENST00000582254 823 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 MIR4512-201ENST00000583257 77 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 AC110743.1-201ENST00000584870 478 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 CCDC58P3-201ENST00000590792 430 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 GAS5-AS1-201ENST00000602767 694 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 AC113368.1-201ENST00000603736 382 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 AC008745.1-201ENST00000604064 271 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.53□□□□□ -1.68
CLCNKAP51800 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.53□□□□□ -1.68
CLCNKAP51800 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLCNKAP51800 AC123768.4-201ENST00000616244 701 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 AL121895.2-201ENST00000619558 447 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CLCNKAP51800 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
CLCNKAP51800 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.53□□□□□ -1.68
CLCNKAP51800 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
CLCNKAP51800 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
CLCNKAP51800 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.53□□□□□ -1.68
CLCNKAP51800 Z98755.1-201ENST00000407015 1384 ntBASIC4.53□□□□□ -1.69
CLCNKAP51800 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.53□□□□□ -1.69
CLCNKAP51800 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.52□□□□□ -1.69
CLCNKAP51800 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.52□□□□□ -1.69
CLCNKAP51800 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.52□□□□□ -1.69
CLCNKAP51800 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.52□□□□□ -1.69
CLCNKAP51800 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLCNKAP51800 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLCNKAP51800 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLCNKAP51800 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLCNKAP51800 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLCNKAP51800 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.52□□□□□ -1.69
CLCNKAP51800 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLCNKAP51800 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CLCNKAP51800 AC021146.4-201ENST00000309229 279 ntBASIC4.52□□□□□ -1.69
CLCNKAP51800 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CLCNKAP51800 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CLCNKAP51800 RNU4-68P-201ENST00000364314 141 ntBASIC4.52□□□□□ -1.69
CLCNKAP51800 TAS2R15P-201ENST00000390674 928 ntBASIC4.52□□□□□ -1.69
CLCNKAP51800 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CLCNKAP51800 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.52□□□□□ -1.69
CLCNKAP51800 RPS3AP37-201ENST00000419176 745 ntBASIC4.52□□□□□ -1.69
CLCNKAP51800 DNAJC19P7-201ENST00000428811 344 ntBASIC4.52□□□□□ -1.69
CLCNKAP51800 CDY14P-201ENST00000431260 1014 ntBASIC4.52□□□□□ -1.69
CLCNKAP51800 CETN4P-201ENST00000432407 469 ntBASIC4.52□□□□□ -1.69
CLCNKAP51800 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.52□□□□□ -1.69
CLCNKAP51800 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.52□□□□□ -1.69
CLCNKAP51800 CDY12P-201ENST00000440679 1015 ntBASIC4.52□□□□□ -1.69
CLCNKAP51800 CR769776.1-201ENST00000441254 787 ntBASIC4.52□□□□□ -1.69
CLCNKAP51800 AL592437.1-201ENST00000443781 492 ntBASIC4.52□□□□□ -1.69
CLCNKAP51800 CDY13P-201ENST00000445813 1015 ntBASIC4.52□□□□□ -1.69
CLCNKAP51800 AC068135.1-201ENST00000446164 246 ntBASIC4.52□□□□□ -1.69
CLCNKAP51800 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CLCNKAP51800 Z73417.1-201ENST00000447373 778 ntBASIC4.52□□□□□ -1.69
CLCNKAP51800 AL162388.1-201ENST00000450912 352 ntBASIC4.52□□□□□ -1.69
CLCNKAP51800 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.52□□□□□ -1.69
CLCNKAP51800 CDY23P-201ENST00000451661 1014 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms