Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 Z98200.1-201ENST00000607298 470 ntBASIC6.37□□□□□ -1.39
USP11P51784 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
USP11P51784 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.37□□□□□ -1.39
USP11P51784 NAMPTP1-201ENST00000440465 2514 ntBASIC6.37□□□□□ -1.39
USP11P51784 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
USP11P51784 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
USP11P51784 AC138907.8-201ENST00000623981 2256 ntBASIC6.37□□□□□ -1.39
USP11P51784 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USP11P51784 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
USP11P51784 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
USP11P51784 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.37□□□□□ -1.39
USP11P51784 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.36□□□□□ -1.39
USP11P51784 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USP11P51784 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USP11P51784 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USP11P51784 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.36□□□□□ -1.39
USP11P51784 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC6.36□□□□□ -1.39
USP11P51784 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC6.36□□□□□ -1.39
USP11P51784 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USP11P51784 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
USP11P51784 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.36□□□□□ -1.39
USP11P51784 RNA5SP326-201ENST00000363209 110 ntBASIC6.36□□□□□ -1.39
USP11P51784 Y_RNA.142-201ENST00000363491 102 ntBASIC6.36□□□□□ -1.39
USP11P51784 AP000357.1-201ENST00000409926 1165 ntBASIC6.36□□□□□ -1.39
USP11P51784 AC092745.2-202ENST00000411880 369 ntBASIC6.36□□□□□ -1.39
USP11P51784 RPS3AP9-201ENST00000417027 792 ntBASIC6.36□□□□□ -1.39
USP11P51784 USP9YP27-201ENST00000418455 438 ntBASIC6.36□□□□□ -1.39
USP11P51784 B3GALNT1P1-201ENST00000420569 975 ntBASIC6.36□□□□□ -1.39
USP11P51784 MTND2P23-201ENST00000422990 651 ntBASIC6.36□□□□□ -1.39
USP11P51784 AC007161.1-204ENST00000423039 460 ntBASIC6.36□□□□□ -1.39
USP11P51784 AL034379.1-201ENST00000423216 253 ntBASIC6.36□□□□□ -1.39
USP11P51784 CHEK2P5-201ENST00000423877 246 ntBASIC6.36□□□□□ -1.39
USP11P51784 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC6.36□□□□□ -1.39
USP11P51784 AL391987.1-201ENST00000441025 200 ntBASIC6.36□□□□□ -1.39
USP11P51784 AL353093.1-201ENST00000441292 436 ntBASIC6.36□□□□□ -1.39
USP11P51784 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.36□□□□□ -1.39
USP11P51784 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.36□□□□□ -1.39
USP11P51784 AC022364.2-201ENST00000457963 554 ntBASIC6.36□□□□□ -1.39
USP11P51784 AC110749.1-201ENST00000462007 357 ntBASIC6.36□□□□□ -1.39
USP11P51784 RN7SL101P-201ENST00000496350 279 ntBASIC6.36□□□□□ -1.39
USP11P51784 RN7SL284P-201ENST00000498823 275 ntBASIC6.36□□□□□ -1.39
USP11P51784 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.36□□□□□ -1.39
USP11P51784 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USP11P51784 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC6.36□□□□□ -1.39
USP11P51784 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.36□□□□□ -1.39
USP11P51784 SAP18P1-201ENST00000512058 390 ntBASIC6.36□□□□□ -1.39
USP11P51784 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC6.36□□□□□ -1.39
USP11P51784 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC6.36□□□□□ -1.39
USP11P51784 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.36□□□□□ -1.39
USP11P51784 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC6.36□□□□□ -1.39
USP11P51784 AC027544.3-201ENST00000535082 757 ntBASIC6.36□□□□□ -1.39
USP11P51784 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC6.36□□□□□ -1.39
USP11P51784 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC6.36□□□□□ -1.39
USP11P51784 AL161729.3-201ENST00000603533 673 ntBASIC6.36□□□□□ -1.39
USP11P51784 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.36□□□□□ -1.39
USP11P51784 AC068880.5-201ENST00000624331 290 ntBASIC6.36□□□□□ -1.39
USP11P51784 MIR1321-201ENST00000637766 79 ntBASIC6.36□□□□□ -1.39
USP11P51784 OR4F13P-202ENST00000560066 2054 ntBASIC6.36□□□□□ -1.39
USP11P51784 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
USP11P51784 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USP11P51784 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USP11P51784 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC6.36□□□□□ -1.39
USP11P51784 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USP11P51784 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USP11P51784 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.36□□□□□ -1.39
USP11P51784 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.35□□□□□ -1.39
USP11P51784 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.35□□□□□ -1.39
USP11P51784 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.35□□□□□ -1.39
USP11P51784 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
USP11P51784 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.35□□□□□ -1.39
USP11P51784 DNM1P47-203ENST00000571780 12667 ntBASIC6.35□□□□□ -1.39
USP11P51784 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.35□□□□□ -1.39
USP11P51784 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
USP11P51784 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.35□□□□□ -1.39
USP11P51784 AL355488.2-201ENST00000609909 2850 ntBASIC6.35□□□□□ -1.39
USP11P51784 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
USP11P51784 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
USP11P51784 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
USP11P51784 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
USP11P51784 MIR551A-201ENST00000385042 96 ntBASIC6.35□□□□□ -1.39
USP11P51784 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.35□□□□□ -1.39
USP11P51784 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.35□□□□□ -1.39
USP11P51784 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.35□□□□□ -1.39
USP11P51784 AP001324.1-201ENST00000428553 399 ntBASIC6.35□□□□□ -1.39
USP11P51784 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.35□□□□□ -1.39
USP11P51784 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC6.35□□□□□ -1.39
USP11P51784 RPL7P11-201ENST00000437586 658 ntBASIC6.35□□□□□ -1.39
USP11P51784 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.35□□□□□ -1.39
USP11P51784 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC6.35□□□□□ -1.39
USP11P51784 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.35□□□□□ -1.39
USP11P51784 SNRPFP4-201ENST00000456366 242 ntBASIC6.35□□□□□ -1.39
USP11P51784 AC087312.1-201ENST00000471411 480 ntBASIC6.35□□□□□ -1.39
USP11P51784 AC091544.1-201ENST00000484702 348 ntBASIC6.35□□□□□ -1.39
USP11P51784 RN7SL466P-201ENST00000497546 295 ntBASIC6.35□□□□□ -1.39
USP11P51784 RPS17P5-201ENST00000498293 408 ntBASIC6.35□□□□□ -1.39
USP11P51784 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
USP11P51784 AC105914.1-201ENST00000511798 226 ntBASIC6.35□□□□□ -1.39
USP11P51784 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC6.35□□□□□ -1.39
USP11P51784 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC6.35□□□□□ -1.39
USP11P51784 SNORA18.6-201ENST00000516792 115 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 128.6 ms