Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.3□□□□□ -1.72
BRCC3P46736 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.3□□□□□ -1.72
BRCC3P46736 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.3□□□□□ -1.72
BRCC3P46736 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
BRCC3P46736 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.3□□□□□ -1.72
BRCC3P46736 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.3□□□□□ -1.72
BRCC3P46736 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.3□□□□□ -1.72
BRCC3P46736 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.3□□□□□ -1.72
BRCC3P46736 MIR5685-201ENST00000579080 79 ntBASIC4.3□□□□□ -1.72
BRCC3P46736 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.3□□□□□ -1.72
BRCC3P46736 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.3□□□□□ -1.72
BRCC3P46736 AC023813.4-201ENST00000607580 580 ntBASIC4.3□□□□□ -1.72
BRCC3P46736 AL392048.1-201ENST00000613946 534 ntBASIC4.3□□□□□ -1.72
BRCC3P46736 AC245389.2-201ENST00000616023 576 ntBASIC4.3□□□□□ -1.72
BRCC3P46736 AC242843.1-201ENST00000618702 573 ntBASIC4.3□□□□□ -1.72
BRCC3P46736 MIR7702-201ENST00000621931 59 ntBASIC4.3□□□□□ -1.72
BRCC3P46736 AP002967.1-201ENST00000624203 539 ntBASIC4.3□□□□□ -1.72
BRCC3P46736 AC020978.9-201ENST00000624380 1141 ntBASIC4.3□□□□□ -1.72
BRCC3P46736 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.3□□□□□ -1.72
BRCC3P46736 OR5AC4P-202ENST00000642086 985 ntBASIC4.3□□□□□ -1.72
BRCC3P46736 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.3□□□□□ -1.72
BRCC3P46736 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BRCC3P46736 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
BRCC3P46736 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
BRCC3P46736 BX005019.1-201ENST00000561881 1810 ntBASIC4.3□□□□□ -1.72
BRCC3P46736 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
BRCC3P46736 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
BRCC3P46736 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BRCC3P46736 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.29□□□□□ -1.72
BRCC3P46736 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
BRCC3P46736 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
BRCC3P46736 AC027290.2-201ENST00000623210 18662 ntBASIC4.29□□□□□ -1.72
BRCC3P46736 RN7SKP222-201ENST00000410651 315 ntBASIC4.29□□□□□ -1.72
BRCC3P46736 TCEA1P4-201ENST00000415066 844 ntBASIC4.29□□□□□ -1.72
BRCC3P46736 AL445584.1-201ENST00000431451 330 ntBASIC4.29□□□□□ -1.72
BRCC3P46736 NDUFA5P10-201ENST00000432147 357 ntBASIC4.29□□□□□ -1.72
BRCC3P46736 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.29□□□□□ -1.72
BRCC3P46736 RAD23BP3-201ENST00000454157 1152 ntBASIC4.29□□□□□ -1.72
BRCC3P46736 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.29□□□□□ -1.72
BRCC3P46736 AC025768.1-201ENST00000510057 267 ntBASIC4.29□□□□□ -1.72
BRCC3P46736 HMGB3P13-201ENST00000511263 607 ntBASIC4.29□□□□□ -1.72
BRCC3P46736 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.29□□□□□ -1.72
BRCC3P46736 SNORA67.7-201ENST00000516664 135 ntBASIC4.29□□□□□ -1.72
BRCC3P46736 RNA5SP179-201ENST00000517284 121 ntBASIC4.29□□□□□ -1.72
BRCC3P46736 MTND1P36-201ENST00000522384 936 ntBASIC4.29□□□□□ -1.72
BRCC3P46736 PDCD5P1-201ENST00000543528 309 ntBASIC4.29□□□□□ -1.72
BRCC3P46736 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.29□□□□□ -1.72
BRCC3P46736 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.29□□□□□ -1.72
BRCC3P46736 AC023158.1-201ENST00000561632 1025 ntBASIC4.29□□□□□ -1.72
BRCC3P46736 AC079171.1-201ENST00000568788 914 ntBASIC4.29□□□□□ -1.72
BRCC3P46736 AC090312.1-201ENST00000580637 348 ntBASIC4.29□□□□□ -1.72
BRCC3P46736 AC091167.4-201ENST00000605079 184 ntBASIC4.29□□□□□ -1.72
BRCC3P46736 AC245389.1-201ENST00000605141 529 ntBASIC4.29□□□□□ -1.72
BRCC3P46736 AL450270.1-201ENST00000606160 391 ntBASIC4.29□□□□□ -1.72
BRCC3P46736 AC015813.4-201ENST00000610469 179 ntBASIC4.29□□□□□ -1.72
BRCC3P46736 CR589904.2-201ENST00000612533 440 ntBASIC4.29□□□□□ -1.72
BRCC3P46736 AP005264.7-201ENST00000625003 745 ntBASIC4.29□□□□□ -1.72
BRCC3P46736 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
BRCC3P46736 MAPK10-304ENST00000641341 3984 ntBASIC4.29□□□□□ -1.72
BRCC3P46736 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
BRCC3P46736 AC087190.4-201ENST00000574616 8334 ntBASIC4.29□□□□□ -1.72
BRCC3P46736 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.29□□□□□ -1.72
BRCC3P46736 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
BRCC3P46736 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
BRCC3P46736 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.28□□□□□ -1.72
BRCC3P46736 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.28□□□□□ -1.72
BRCC3P46736 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
BRCC3P46736 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
BRCC3P46736 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
BRCC3P46736 RNU6-532P-201ENST00000384318 107 ntBASIC4.28□□□□□ -1.72
BRCC3P46736 MIR23B-201ENST00000384832 97 ntBASIC4.28□□□□□ -1.72
BRCC3P46736 MIR320B1-201ENST00000390209 79 ntBASIC4.28□□□□□ -1.72
BRCC3P46736 AL356057.1-202ENST00000402263 756 ntBASIC4.28□□□□□ -1.72
BRCC3P46736 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.28□□□□□ -1.72
BRCC3P46736 RRM2P4-201ENST00000441721 562 ntBASIC4.28□□□□□ -1.72
BRCC3P46736 CASP3P1-201ENST00000446037 609 ntBASIC4.28□□□□□ -1.72
BRCC3P46736 AL353718.1-201ENST00000451028 517 ntBASIC4.28□□□□□ -1.72
BRCC3P46736 RN7SL809P-201ENST00000482040 297 ntBASIC4.28□□□□□ -1.72
BRCC3P46736 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.28□□□□□ -1.72
BRCC3P46736 UBA52P3-201ENST00000491303 382 ntBASIC4.28□□□□□ -1.72
BRCC3P46736 RPL21P129-201ENST00000491732 478 ntBASIC4.28□□□□□ -1.72
BRCC3P46736 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC4.28□□□□□ -1.72
BRCC3P46736 CDH12P2-201ENST00000504393 298 ntBASIC4.28□□□□□ -1.72
BRCC3P46736 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.28□□□□□ -1.72
BRCC3P46736 MTCO1P31-201ENST00000506355 492 ntBASIC4.28□□□□□ -1.72
BRCC3P46736 RNU6-352P-201ENST00000516908 107 ntBASIC4.28□□□□□ -1.72
BRCC3P46736 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.28□□□□□ -1.72
BRCC3P46736 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
BRCC3P46736 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC4.28□□□□□ -1.72
BRCC3P46736 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC4.28□□□□□ -1.72
BRCC3P46736 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.28□□□□□ -1.72
BRCC3P46736 LINC00557-201ENST00000563184 1279 ntBASIC4.28□□□□□ -1.72
BRCC3P46736 AC074050.1-201ENST00000563247 211 ntBASIC4.28□□□□□ -1.72
BRCC3P46736 AC090079.2-201ENST00000575289 768 ntBASIC4.28□□□□□ -1.72
BRCC3P46736 MIR4429-201ENST00000580105 73 ntBASIC4.28□□□□□ -1.72
BRCC3P46736 MIR3158-1-201ENST00000583596 81 ntBASIC4.28□□□□□ -1.72
BRCC3P46736 AC107982.3-201ENST00000584957 985 ntBASIC4.28□□□□□ -1.72
BRCC3P46736 AC005255.1-201ENST00000593748 216 ntBASIC4.28□□□□□ -1.72
BRCC3P46736 AC005014.3-201ENST00000605985 190 ntBASIC4.28□□□□□ -1.72
BRCC3P46736 AC006133.1-201ENST00000617106 264 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms