Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TNFRSF4P43489 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
TNFRSF4P43489 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TNFRSF4P43489 Y_RNA.110-201ENST00000363220 99 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 RNU6-792P-201ENST00000363490 107 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 RNU6-796P-201ENST00000391086 107 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 RN7SKP247-201ENST00000411094 308 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 CYCSP19-201ENST00000411715 316 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.22□□□□□ -1.73
TNFRSF4P43489 DYNLL1P7-201ENST00000429273 258 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC4.22□□□□□ -1.73
TNFRSF4P43489 AC007389.2-201ENST00000434630 306 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 RRM2P4-201ENST00000441721 562 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.22□□□□□ -1.73
TNFRSF4P43489 ARL5AP2-201ENST00000444698 533 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 RPS27AP15-201ENST00000447672 466 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.22□□□□□ -1.73
TNFRSF4P43489 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.22□□□□□ -1.73
TNFRSF4P43489 PHBP17-201ENST00000528576 541 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 AP003049.1-201ENST00000529418 457 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.22□□□□□ -1.73
TNFRSF4P43489 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.22□□□□□ -1.73
TNFRSF4P43489 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.22□□□□□ -1.73
TNFRSF4P43489 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 DPRXP4-201ENST00000578053 568 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 RN7SL703P-201ENST00000578485 302 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 MIR4429-201ENST00000580105 73 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 AC008759.1-201ENST00000589783 983 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 BNIP3P22-201ENST00000593399 556 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 AC005972.3-201ENST00000606304 481 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.22□□□□□ -1.73
TNFRSF4P43489 AC099669.2-201ENST00000616549 437 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 AC006133.1-201ENST00000617106 264 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 MIR7151-201ENST00000617477 60 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 AL109620.1-201ENST00000618738 1197 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
TNFRSF4P43489 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
TNFRSF4P43489 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
TNFRSF4P43489 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.22□□□□□ -1.73
TNFRSF4P43489 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.22□□□□□ -1.73
TNFRSF4P43489 AC116667.1-201ENST00000604855 2072 ntBASIC4.22□□□□□ -1.73
TNFRSF4P43489 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
TNFRSF4P43489 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
TNFRSF4P43489 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.21□□□□□ -1.73
TNFRSF4P43489 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TNFRSF4P43489 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
TNFRSF4P43489 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.21□□□□□ -1.73
TNFRSF4P43489 HSPA8P19-201ENST00000505359 1517 ntBASIC4.21□□□□□ -1.73
TNFRSF4P43489 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TNFRSF4P43489 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.21□□□□□ -1.74
TNFRSF4P43489 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.21□□□□□ -1.74
TNFRSF4P43489 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TNFRSF4P43489 SNORA60-201ENST00000362396 134 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 SNORA62.3-201ENST00000365110 153 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 ATP5F1P3-201ENST00000397213 657 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 AC234782.4-201ENST00000417646 1048 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 AL389915.1-201ENST00000422463 466 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 VN1R42P-201ENST00000424651 344 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 ABCF2P2-201ENST00000450549 296 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 RPL37P3-201ENST00000456825 293 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.21□□□□□ -1.74
TNFRSF4P43489 AC133963.2-201ENST00000513686 578 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 RNA5SP360-201ENST00000516555 118 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 RNU1-45P-201ENST00000517191 141 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.21□□□□□ -1.74
TNFRSF4P43489 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.21□□□□□ -1.74
TNFRSF4P43489 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.21□□□□□ -1.74
TNFRSF4P43489 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.21□□□□□ -1.74
TNFRSF4P43489 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC4.21□□□□□ -1.74
TNFRSF4P43489 GLRXP2-201ENST00000555594 321 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 AC084757.1-201ENST00000559987 490 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 AC106785.3-201ENST00000564064 847 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 NF1P5-201ENST00000588287 448 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.21□□□□□ -1.74
TNFRSF4P43489 AC006946.3-201ENST00000609791 756 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 AC140113.4-201ENST00000622087 222 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 AC097460.3-201ENST00000623099 442 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 AP003072.4-201ENST00000624580 310 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 AP003400.6-201ENST00000624698 740 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 AC097372.4-201ENST00000625025 466 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.21□□□□□ -1.74
TNFRSF4P43489 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.21□□□□□ -1.74
TNFRSF4P43489 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.21□□□□□ -1.74
TNFRSF4P43489 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
TNFRSF4P43489 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
TNFRSF4P43489 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.21□□□□□ -1.74
TNFRSF4P43489 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
TNFRSF4P43489 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
TNFRSF4P43489 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
TNFRSF4P43489 AP000473.2-201ENST00000602659 1537 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
TNFRSF4P43489 MTCO1P18-201ENST00000455518 1419 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.21□□□□□ -1.74
TNFRSF4P43489 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
TNFRSF4P43489 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TNFRSF4P43489 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
TNFRSF4P43489 AL672167.1-205ENST00000641112 3080 ntBASIC4.2□□□□□ -1.74
TNFRSF4P43489 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
TNFRSF4P43489 RNU6-1005P-201ENST00000384519 107 ntBASIC4.2□□□□□ -1.74
TNFRSF4P43489 HSPE1P12-201ENST00000412576 301 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 169.2 ms