Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.41□□□□□ -1.7
SSR1P43307 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC4.41□□□□□ -1.7
SSR1P43307 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.41□□□□□ -1.7
SSR1P43307 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.41□□□□□ -1.7
SSR1P43307 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
SSR1P43307 AC139713.2-214ENST00000642059 1811 ntBASIC4.41□□□□□ -1.7
SSR1P43307 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SSR1P43307 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.41□□□□□ -1.7
SSR1P43307 AC007342.9-201ENST00000623877 1385 ntBASIC4.4□□□□□ -1.7
SSR1P43307 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.4□□□□□ -1.7
SSR1P43307 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.4□□□□□ -1.7
SSR1P43307 RNU1-14P-201ENST00000362759 152 ntBASIC4.4□□□□□ -1.71
SSR1P43307 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
SSR1P43307 RNU6-532P-201ENST00000384318 107 ntBASIC4.4□□□□□ -1.71
SSR1P43307 AL035696.2-201ENST00000407941 709 ntBASIC4.4□□□□□ -1.71
SSR1P43307 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.4□□□□□ -1.71
SSR1P43307 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.4□□□□□ -1.71
SSR1P43307 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.4□□□□□ -1.71
SSR1P43307 AC011933.1-201ENST00000413334 321 ntBASIC4.4□□□□□ -1.71
SSR1P43307 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.4□□□□□ -1.71
SSR1P43307 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSR1P43307 AC009480.2-201ENST00000422916 432 ntBASIC4.4□□□□□ -1.71
SSR1P43307 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.4□□□□□ -1.71
SSR1P43307 RPS29P17-201ENST00000430795 166 ntBASIC4.4□□□□□ -1.71
SSR1P43307 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.4□□□□□ -1.71
SSR1P43307 HMGB3P22-202ENST00000451823 572 ntBASIC4.4□□□□□ -1.71
SSR1P43307 AC116533.1-201ENST00000459748 321 ntBASIC4.4□□□□□ -1.71
SSR1P43307 RN7SL738P-201ENST00000470264 297 ntBASIC4.4□□□□□ -1.71
SSR1P43307 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.4□□□□□ -1.71
SSR1P43307 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.4□□□□□ -1.71
SSR1P43307 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC4.4□□□□□ -1.71
SSR1P43307 RNA5SP49-201ENST00000516450 115 ntBASIC4.4□□□□□ -1.71
SSR1P43307 RNU6-1308P-201ENST00000516817 103 ntBASIC4.4□□□□□ -1.71
SSR1P43307 NARSP2-201ENST00000518524 679 ntBASIC4.4□□□□□ -1.71
SSR1P43307 OR8G5-201ENST00000524943 1041 ntBASIC4.4□□□□□ -1.71
SSR1P43307 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSR1P43307 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.4□□□□□ -1.71
SSR1P43307 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.4□□□□□ -1.71
SSR1P43307 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.4□□□□□ -1.71
SSR1P43307 AC012603.1-201ENST00000606424 528 ntBASIC4.4□□□□□ -1.71
SSR1P43307 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.4□□□□□ -1.71
SSR1P43307 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.4□□□□□ -1.71
SSR1P43307 AL391834.1-201ENST00000609609 560 ntBASIC4.4□□□□□ -1.71
SSR1P43307 AC064801.1-201ENST00000612025 407 ntBASIC4.4□□□□□ -1.71
SSR1P43307 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSR1P43307 AP000346.3-201ENST00000622821 210 ntBASIC4.4□□□□□ -1.71
SSR1P43307 AC073342.3-201ENST00000624211 193 ntBASIC4.4□□□□□ -1.71
SSR1P43307 AC019080.5-201ENST00000624891 757 ntBASIC4.4□□□□□ -1.71
SSR1P43307 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.4□□□□□ -1.71
SSR1P43307 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSR1P43307 AC024560.2-201ENST00000507981 1497 ntBASIC4.4□□□□□ -1.71
SSR1P43307 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSR1P43307 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSR1P43307 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SSR1P43307 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.4□□□□□ -1.71
SSR1P43307 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SSR1P43307 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
SSR1P43307 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
SSR1P43307 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSR1P43307 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSR1P43307 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SSR1P43307 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SSR1P43307 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.39□□□□□ -1.71
SSR1P43307 HMGB1P10-201ENST00000395823 563 ntBASIC4.39□□□□□ -1.71
SSR1P43307 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.39□□□□□ -1.71
SSR1P43307 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.39□□□□□ -1.71
SSR1P43307 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SSR1P43307 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SSR1P43307 AIMP1P1-201ENST00000418670 937 ntBASIC4.39□□□□□ -1.71
SSR1P43307 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.39□□□□□ -1.71
SSR1P43307 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
SSR1P43307 ACTR3P2-201ENST00000439585 1257 ntBASIC4.39□□□□□ -1.71
SSR1P43307 AL606490.8-201ENST00000441624 319 ntBASIC4.39□□□□□ -1.71
SSR1P43307 RAD1P2-201ENST00000446414 663 ntBASIC4.39□□□□□ -1.71
SSR1P43307 HMGN2P21-201ENST00000447764 270 ntBASIC4.39□□□□□ -1.71
SSR1P43307 AC006511.1-201ENST00000470614 315 ntBASIC4.39□□□□□ -1.71
SSR1P43307 AC006517.1-201ENST00000480485 328 ntBASIC4.39□□□□□ -1.71
SSR1P43307 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC4.39□□□□□ -1.71
SSR1P43307 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC4.39□□□□□ -1.71
SSR1P43307 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.39□□□□□ -1.71
SSR1P43307 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.39□□□□□ -1.71
SSR1P43307 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.39□□□□□ -1.71
SSR1P43307 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.39□□□□□ -1.71
SSR1P43307 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.39□□□□□ -1.71
SSR1P43307 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.39□□□□□ -1.71
SSR1P43307 AC073111.2-201ENST00000605657 1075 ntBASIC4.39□□□□□ -1.71
SSR1P43307 AC019193.2-201ENST00000610012 634 ntBASIC4.39□□□□□ -1.71
SSR1P43307 AC048347.1-201ENST00000624621 427 ntBASIC4.39□□□□□ -1.71
SSR1P43307 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
SSR1P43307 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
SSR1P43307 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
SSR1P43307 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
SSR1P43307 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
SSR1P43307 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.38□□□□□ -1.71
SSR1P43307 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.38□□□□□ -1.71
SSR1P43307 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.38□□□□□ -1.71
SSR1P43307 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.38□□□□□ -1.71
SSR1P43307 AC068287.1-201ENST00000430283 295 ntBASIC4.38□□□□□ -1.71
SSR1P43307 NDUFA5P10-201ENST00000432147 357 ntBASIC4.38□□□□□ -1.71
SSR1P43307 NEK4P1-201ENST00000433383 879 ntBASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms