Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.86□□□□□ -1.79
HTTP42858 AP000255.1-201ENST00000610276 676 ntBASIC3.86□□□□□ -1.79
HTTP42858 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
HTTP42858 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.85□□□□□ -1.79
HTTP42858 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
HTTP42858 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC3.85□□□□□ -1.79
HTTP42858 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC3.85□□□□□ -1.79
HTTP42858 ZYG11AP1-201ENST00000430329 837 ntBASIC3.85□□□□□ -1.79
HTTP42858 RPL32P28-201ENST00000443577 397 ntBASIC3.85□□□□□ -1.79
HTTP42858 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.85□□□□□ -1.79
HTTP42858 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.85□□□□□ -1.79
HTTP42858 OR2AS2P-201ENST00000606902 342 ntBASIC3.85□□□□□ -1.79
HTTP42858 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HTTP42858 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC3.85□□□□□ -1.79
HTTP42858 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HTTP42858 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HTTP42858 MIR133A2-201ENST00000347538 102 ntBASIC3.85□□□□□ -1.79
HTTP42858 RNA5SP235-201ENST00000365411 114 ntBASIC3.85□□□□□ -1.79
HTTP42858 MIR1271-201ENST00000408537 86 ntBASIC3.85□□□□□ -1.79
HTTP42858 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.85□□□□□ -1.79
HTTP42858 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC3.85□□□□□ -1.79
HTTP42858 BX276092.4-201ENST00000452056 248 ntBASIC3.85□□□□□ -1.79
HTTP42858 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.85□□□□□ -1.79
HTTP42858 AC109458.1-201ENST00000508858 316 ntBASIC3.85□□□□□ -1.79
HTTP42858 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
HTTP42858 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.85□□□□□ -1.79
HTTP42858 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
HTTP42858 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC3.85□□□□□ -1.79
HTTP42858 AC006504.1-201ENST00000562493 3666 ntBASIC3.84□□□□□ -1.79
HTTP42858 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
HTTP42858 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HTTP42858 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC3.84□□□□□ -1.79
HTTP42858 HMGN1P24-201ENST00000412282 298 ntBASIC3.84□□□□□ -1.79
HTTP42858 AL691447.1-201ENST00000419456 387 ntBASIC3.84□□□□□ -1.79
HTTP42858 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.84□□□□□ -1.79
HTTP42858 RPS29P26-201ENST00000477483 171 ntBASIC3.84□□□□□ -1.79
HTTP42858 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC3.84□□□□□ -1.79
HTTP42858 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC3.84□□□□□ -1.79
HTTP42858 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.84□□□□□ -1.79
HTTP42858 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.84□□□□□ -1.79
HTTP42858 AC112503.1-201ENST00000608436 391 ntBASIC3.84□□□□□ -1.79
HTTP42858 AC100793.4-201ENST00000613683 429 ntBASIC3.84□□□□□ -1.79
HTTP42858 AP003485.2-201ENST00000623636 610 ntBASIC3.84□□□□□ -1.79
HTTP42858 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HTTP42858 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.84□□□□□ -1.79
HTTP42858 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
HTTP42858 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
HTTP42858 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
HTTP42858 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.84□□□□□ -1.79
HTTP42858 AC097478.1-206ENST00000513572 2010 ntTSL 3 BASIC3.84□□□□□ -1.79
HTTP42858 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HTTP42858 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
HTTP42858 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HTTP42858 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
HTTP42858 OR5AW1P-201ENST00000426334 1006 ntBASIC3.84□□□□□ -1.79
HTTP42858 NPM1P48-201ENST00000436002 853 ntBASIC3.84□□□□□ -1.79
HTTP42858 RN7SL432P-201ENST00000484057 298 ntBASIC3.84□□□□□ -1.79
HTTP42858 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.84□□□□□ -1.79
HTTP42858 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.84□□□□□ -1.79
HTTP42858 DNM1P47-203ENST00000571780 12667 ntBASIC3.84□□□□□ -1.79
HTTP42858 AL022323.4-201ENST00000623980 13120 ntBASIC3.84□□□□□ -1.79
HTTP42858 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HTTP42858 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HTTP42858 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.84□□□□□ -1.79
HTTP42858 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC3.84□□□□□ -1.8
HTTP42858 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HTTP42858 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
HTTP42858 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
HTTP42858 RNU1-70P-201ENST00000362618 164 ntBASIC3.84□□□□□ -1.8
HTTP42858 AL135938.1-201ENST00000443141 297 ntBASIC3.84□□□□□ -1.8
HTTP42858 AL031584.1-201ENST00000447169 754 ntBASIC3.84□□□□□ -1.8
HTTP42858 AL109933.2-201ENST00000452651 260 ntBASIC3.84□□□□□ -1.8
HTTP42858 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.84□□□□□ -1.8
HTTP42858 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.84□□□□□ -1.8
HTTP42858 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
HTTP42858 NAMPTP1-201ENST00000440465 2514 ntBASIC3.83□□□□□ -1.8
HTTP42858 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC3.83□□□□□ -1.8
HTTP42858 TCEANC2-201ENST00000234827 10436 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HTTP42858 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC3.83□□□□□ -1.8
HTTP42858 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC3.83□□□□□ -1.8
HTTP42858 OR5H2-201ENST00000355273 945 ntBASIC3.83□□□□□ -1.8
HTTP42858 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
HTTP42858 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.83□□□□□ -1.8
HTTP42858 S100A11P1-201ENST00000477525 312 ntBASIC3.83□□□□□ -1.8
HTTP42858 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.83□□□□□ -1.8
HTTP42858 AC103783.1-201ENST00000520506 373 ntBASIC3.83□□□□□ -1.8
HTTP42858 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC3.83□□□□□ -1.8
HTTP42858 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HTTP42858 UBE3AP2-201ENST00000429033 2259 ntBASIC3.83□□□□□ -1.8
HTTP42858 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC3.83□□□□□ -1.8
HTTP42858 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HTTP42858 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
HTTP42858 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HTTP42858 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HTTP42858 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
HTTP42858 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC3.83□□□□□ -1.8
HTTP42858 RNU4-47P-201ENST00000410876 114 ntBASIC3.83□□□□□ -1.8
HTTP42858 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
HTTP42858 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC3.83□□□□□ -1.8
HTTP42858 NPM1P13-201ENST00000452663 865 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms