Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
FDFT1P37268 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.07□□□□□ -1.76
FDFT1P37268 ENSAP1-201ENST00000392855 326 ntBASIC4.07□□□□□ -1.76
FDFT1P37268 AL512504.1-201ENST00000415494 778 ntBASIC4.07□□□□□ -1.76
FDFT1P37268 USP12PY-201ENST00000427677 1064 ntBASIC4.07□□□□□ -1.76
FDFT1P37268 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
FDFT1P37268 MTCO1P57-201ENST00000432182 261 ntBASIC4.07□□□□□ -1.76
FDFT1P37268 MTCO1P52-201ENST00000433928 531 ntBASIC4.07□□□□□ -1.76
FDFT1P37268 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.07□□□□□ -1.76
FDFT1P37268 CBX1P4-201ENST00000439415 457 ntBASIC4.07□□□□□ -1.76
FDFT1P37268 HMGB1P37-201ENST00000439613 609 ntBASIC4.07□□□□□ -1.76
FDFT1P37268 AC245517.2-201ENST00000442890 346 ntBASIC4.07□□□□□ -1.76
FDFT1P37268 SBDSP1-204ENST00000453858 737 ntBASIC4.07□□□□□ -1.76
FDFT1P37268 AP002345.1-201ENST00000456493 928 ntBASIC4.07□□□□□ -1.76
FDFT1P37268 RN7SL860P-201ENST00000473738 223 ntBASIC4.07□□□□□ -1.76
FDFT1P37268 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.07□□□□□ -1.76
FDFT1P37268 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.07□□□□□ -1.76
FDFT1P37268 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.07□□□□□ -1.76
FDFT1P37268 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.07□□□□□ -1.76
FDFT1P37268 AC026726.1-201ENST00000512859 601 ntBASIC4.07□□□□□ -1.76
FDFT1P37268 RNU6-751P-201ENST00000516382 101 ntBASIC4.07□□□□□ -1.76
FDFT1P37268 RNA5SP143-201ENST00000516936 115 ntBASIC4.07□□□□□ -1.76
FDFT1P37268 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.07□□□□□ -1.76
FDFT1P37268 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.07□□□□□ -1.76
FDFT1P37268 AC022790.1-201ENST00000522872 204 ntBASIC4.07□□□□□ -1.76
FDFT1P37268 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.07□□□□□ -1.76
FDFT1P37268 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.07□□□□□ -1.76
FDFT1P37268 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC4.07□□□□□ -1.76
FDFT1P37268 AC091516.1-201ENST00000549191 703 ntBASIC4.07□□□□□ -1.76
FDFT1P37268 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.07□□□□□ -1.76
FDFT1P37268 AL049870.4-201ENST00000555741 486 ntBASIC4.07□□□□□ -1.76
FDFT1P37268 AC023158.1-201ENST00000561632 1025 ntBASIC4.07□□□□□ -1.76
FDFT1P37268 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.07□□□□□ -1.76
FDFT1P37268 MIR3138-201ENST00000585238 82 ntBASIC4.07□□□□□ -1.76
FDFT1P37268 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC4.07□□□□□ -1.76
FDFT1P37268 NF1P5-201ENST00000588287 448 ntBASIC4.07□□□□□ -1.76
FDFT1P37268 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.07□□□□□ -1.76
FDFT1P37268 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC4.07□□□□□ -1.76
FDFT1P37268 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.07□□□□□ -1.76
FDFT1P37268 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
FDFT1P37268 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.06□□□□□ -1.76
FDFT1P37268 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FDFT1P37268 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.06□□□□□ -1.76
FDFT1P37268 RNU1-87P-201ENST00000363727 170 ntBASIC4.06□□□□□ -1.76
FDFT1P37268 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FDFT1P37268 MIR3074-201ENST00000384885 81 ntBASIC4.06□□□□□ -1.76
FDFT1P37268 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.06□□□□□ -1.76
FDFT1P37268 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.06□□□□□ -1.76
FDFT1P37268 RPL18P10-201ENST00000425606 538 ntBASIC4.06□□□□□ -1.76
FDFT1P37268 MRPL50P1-201ENST00000431951 384 ntBASIC4.06□□□□□ -1.76
FDFT1P37268 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.06□□□□□ -1.76
FDFT1P37268 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.06□□□□□ -1.76
FDFT1P37268 AC083863.1-201ENST00000438811 231 ntBASIC4.06□□□□□ -1.76
FDFT1P37268 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.06□□□□□ -1.76
FDFT1P37268 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC4.06□□□□□ -1.76
FDFT1P37268 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.06□□□□□ -1.76
FDFT1P37268 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.06□□□□□ -1.76
FDFT1P37268 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.06□□□□□ -1.76
FDFT1P37268 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.06□□□□□ -1.76
FDFT1P37268 TPMTP4-201ENST00000450749 678 ntBASIC4.06□□□□□ -1.76
FDFT1P37268 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.06□□□□□ -1.76
FDFT1P37268 HMGB1P47-201ENST00000511281 589 ntBASIC4.06□□□□□ -1.76
FDFT1P37268 AC018797.3-201ENST00000513388 1241 ntBASIC4.06□□□□□ -1.76
FDFT1P37268 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.06□□□□□ -1.76
FDFT1P37268 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.06□□□□□ -1.76
FDFT1P37268 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
FDFT1P37268 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.06□□□□□ -1.76
FDFT1P37268 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC4.06□□□□□ -1.76
FDFT1P37268 AC106785.3-201ENST00000564064 847 ntBASIC4.06□□□□□ -1.76
FDFT1P37268 MIR4284-201ENST00000578924 81 ntBASIC4.06□□□□□ -1.76
FDFT1P37268 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.06□□□□□ -1.76
FDFT1P37268 MIR4443-201ENST00000585052 53 ntBASIC4.06□□□□□ -1.76
FDFT1P37268 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC4.06□□□□□ -1.76
FDFT1P37268 MIMT1-201ENST00000597105 1050 ntBASIC4.06□□□□□ -1.76
FDFT1P37268 AC010680.3-201ENST00000604215 520 ntBASIC4.06□□□□□ -1.76
FDFT1P37268 AC012557.1-201ENST00000607115 611 ntBASIC4.06□□□□□ -1.76
FDFT1P37268 MIR6820-201ENST00000611508 62 ntBASIC4.06□□□□□ -1.76
FDFT1P37268 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
FDFT1P37268 AL445567.2-201ENST00000618935 498 ntBASIC4.06□□□□□ -1.76
FDFT1P37268 AL139089.1-201ENST00000620372 975 ntBASIC4.06□□□□□ -1.76
FDFT1P37268 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.06□□□□□ -1.76
FDFT1P37268 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.06□□□□□ -1.76
FDFT1P37268 METTL8-219ENST00000640734 726 ntTSL 2 BASIC4.06□□□□□ -1.76
FDFT1P37268 AL136964.1-201ENST00000622038 2990 ntBASIC4.06□□□□□ -1.76
FDFT1P37268 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.06□□□□□ -1.76
FDFT1P37268 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.05□□□□□ -1.76
FDFT1P37268 AC006042.3-201ENST00000454684 1469 ntBASIC4.05□□□□□ -1.76
FDFT1P37268 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FDFT1P37268 MFSD8-220ENST00000641243 1422 ntBASIC4.05□□□□□ -1.76
FDFT1P37268 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FDFT1P37268 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
FDFT1P37268 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
FDFT1P37268 RNU1-32P-201ENST00000363937 159 ntBASIC4.05□□□□□ -1.76
FDFT1P37268 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
FDFT1P37268 RNU4-31P-201ENST00000384211 141 ntBASIC4.05□□□□□ -1.76
FDFT1P37268 OR6C69P-201ENST00000394268 893 ntBASIC4.05□□□□□ -1.76
FDFT1P37268 AC016397.1-201ENST00000412463 242 ntBASIC4.05□□□□□ -1.76
FDFT1P37268 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.05□□□□□ -1.76
FDFT1P37268 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.05□□□□□ -1.76
FDFT1P37268 AL031663.1-201ENST00000437445 219 ntBASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms