Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 OR52A4P-201ENST00000472867 958 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC2.94□□□□□ -1.94
CXCL1P09341 AC011037.1-201ENST00000483964 558 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 AF213884.1-201ENST00000488102 463 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC2.94□□□□□ -1.94
CXCL1P09341 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CXCL1P09341 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC2.94□□□□□ -1.94
CXCL1P09341 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC2.94□□□□□ -1.94
CXCL1P09341 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
CXCL1P09341 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC2.94□□□□□ -1.94
CXCL1P09341 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC2.94□□□□□ -1.94
CXCL1P09341 TRAV8-5-201ENST00000537369 341 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC2.94□□□□□ -1.94
CXCL1P09341 UBE2NP1-201ENST00000545592 458 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC2.94□□□□□ -1.94
CXCL1P09341 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC2.94□□□□□ -1.94
CXCL1P09341 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CXCL1P09341 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC2.94□□□□□ -1.94
CXCL1P09341 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC2.94□□□□□ -1.94
CXCL1P09341 AC010680.4-201ENST00000605334 543 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 MIR7151-201ENST00000617477 60 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 AL445528.2-201ENST00000620582 470 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 AC018445.2-201ENST00000622987 260 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 C2orf27A-204ENST00000623058 969 ntBASIC2.94□□□□□ -1.94
CXCL1P09341 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC2.94□□□□□ -1.94
CXCL1P09341 UOX-205ENST00000640983 544 ntTSL 4 BASIC2.94□□□□□ -1.94
CXCL1P09341 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC2.94□□□□□ -1.94
CXCL1P09341 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.94□□□□□ -1.94
CXCL1P09341 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC2.94□□□□□ -1.94
CXCL1P09341 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CXCL1P09341 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC2.94□□□□□ -1.94
CXCL1P09341 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CXCL1P09341 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CXCL1P09341 AC025125.1-201ENST00000624743 1922 ntBASIC2.93□□□□□ -1.94
CXCL1P09341 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.93□□□□□ -1.94
CXCL1P09341 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC2.93□□□□□ -1.94
CXCL1P09341 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
CXCL1P09341 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC2.93□□□□□ -1.94
CXCL1P09341 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC2.93□□□□□ -1.94
CXCL1P09341 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CXCL1P09341 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CXCL1P09341 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CXCL1P09341 AL034374.1-201ENST00000406329 351 ntBASIC2.93□□□□□ -1.94
CXCL1P09341 AC119751.6-201ENST00000416712 186 ntBASIC2.93□□□□□ -1.94
CXCL1P09341 RPL17P36-201ENST00000420302 549 ntBASIC2.93□□□□□ -1.94
CXCL1P09341 AC006065.1-201ENST00000422539 802 ntBASIC2.93□□□□□ -1.94
CXCL1P09341 RPEP3-201ENST00000425462 676 ntBASIC2.93□□□□□ -1.94
CXCL1P09341 AP000907.1-201ENST00000428428 510 ntBASIC2.93□□□□□ -1.94
CXCL1P09341 RPL23AP1-201ENST00000428990 471 ntBASIC2.93□□□□□ -1.94
CXCL1P09341 BTF3P10-201ENST00000433415 495 ntBASIC2.93□□□□□ -1.94
CXCL1P09341 AL138878.2-201ENST00000440581 1241 ntBASIC2.93□□□□□ -1.94
CXCL1P09341 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC2.93□□□□□ -1.94
CXCL1P09341 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
CXCL1P09341 TRAV31-201ENST00000502780 342 ntBASIC2.93□□□□□ -1.94
CXCL1P09341 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CXCL1P09341 IGLVIV-65-201ENST00000517313 360 ntBASIC2.93□□□□□ -1.94
CXCL1P09341 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC2.93□□□□□ -1.94
CXCL1P09341 EIF4A2P3-201ENST00000525903 1055 ntBASIC2.93□□□□□ -1.94
CXCL1P09341 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC2.93□□□□□ -1.94
CXCL1P09341 AC087888.1-201ENST00000550884 1254 ntBASIC2.93□□□□□ -1.94
CXCL1P09341 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC2.93□□□□□ -1.94
CXCL1P09341 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
CXCL1P09341 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC2.93□□□□□ -1.94
CXCL1P09341 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
CXCL1P09341 AL161729.3-201ENST00000603533 673 ntBASIC2.93□□□□□ -1.94
CXCL1P09341 AC005191.1-201ENST00000603950 358 ntBASIC2.93□□□□□ -1.94
CXCL1P09341 AC115621.1-201ENST00000604653 858 ntBASIC2.93□□□□□ -1.94
CXCL1P09341 AL049634.3-201ENST00000604968 457 ntBASIC2.93□□□□□ -1.94
CXCL1P09341 MIR6886-201ENST00000619864 61 ntBASIC2.93□□□□□ -1.94
CXCL1P09341 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC2.93□□□□□ -1.94
CXCL1P09341 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.93□□□□□ -1.94
CXCL1P09341 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC2.93□□□□□ -1.94
CXCL1P09341 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CXCL1P09341 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CXCL1P09341 MTND5P27-201ENST00000428871 1720 ntBASIC2.93□□□□□ -1.94
CXCL1P09341 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CXCL1P09341 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CXCL1P09341 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.93□□□□□ -1.94
CXCL1P09341 AC138393.1-206ENST00000540997 1886 ntBASIC2.92□□□□□ -1.94
CXCL1P09341 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CXCL1P09341 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
CXCL1P09341 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CXCL1P09341 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CXCL1P09341 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
CXCL1P09341 SNORA73.2-201ENST00000364946 201 ntBASIC2.92□□□□□ -1.94
CXCL1P09341 U3.15-201ENST00000365398 212 ntBASIC2.92□□□□□ -1.94
CXCL1P09341 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CXCL1P09341 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CXCL1P09341 RPL12P3-201ENST00000440080 396 ntBASIC2.92□□□□□ -1.94
CXCL1P09341 RAB28P3-201ENST00000448325 597 ntBASIC2.92□□□□□ -1.94
CXCL1P09341 AC016724.1-201ENST00000453215 421 ntBASIC2.92□□□□□ -1.94
CXCL1P09341 RPL23AP62-201ENST00000463396 453 ntBASIC2.92□□□□□ -1.94
CXCL1P09341 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC2.92□□□□□ -1.94
CXCL1P09341 RN7SL604P-201ENST00000492589 296 ntBASIC2.92□□□□□ -1.94
CXCL1P09341 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC2.92□□□□□ -1.94
CXCL1P09341 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC2.92□□□□□ -1.94
CXCL1P09341 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC2.92□□□□□ -1.94
CXCL1P09341 ATG10-208ENST00000513634 618 ntTSL 2 BASIC2.92□□□□□ -1.94
CXCL1P09341 OR8G5-201ENST00000524943 1041 ntBASIC2.92□□□□□ -1.94
CXCL1P09341 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms