Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC067852.4-201ENST00000590314 478 ntBASIC3.43□□□□□ -1.86
CD74P04233 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CD74P04233 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.43□□□□□ -1.86
CD74P04233 AC114878.2-201ENST00000604863 1251 ntBASIC3.43□□□□□ -1.86
CD74P04233 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.43□□□□□ -1.86
CD74P04233 AL391834.1-201ENST00000609609 560 ntBASIC3.43□□□□□ -1.86
CD74P04233 AC090246.1-201ENST00000616499 426 ntBASIC3.43□□□□□ -1.86
CD74P04233 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.43□□□□□ -1.86
CD74P04233 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC3.43□□□□□ -1.86
CD74P04233 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.43□□□□□ -1.86
CD74P04233 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
CD74P04233 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.43□□□□□ -1.86
CD74P04233 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.43□□□□□ -1.86
CD74P04233 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
CD74P04233 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC3.43□□□□□ -1.86
CD74P04233 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.42□□□□□ -1.86
CD74P04233 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CD74P04233 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CD74P04233 AC083799.1-201ENST00000366451 910 ntBASIC3.42□□□□□ -1.86
CD74P04233 MIR1251-201ENST00000408552 70 ntBASIC3.42□□□□□ -1.86
CD74P04233 RPL30P2-201ENST00000414021 291 ntBASIC3.42□□□□□ -1.86
CD74P04233 AC119751.6-201ENST00000416712 186 ntBASIC3.42□□□□□ -1.86
CD74P04233 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.42□□□□□ -1.86
CD74P04233 RPS24P8-201ENST00000431490 402 ntBASIC3.42□□□□□ -1.86
CD74P04233 RPL23AP46-201ENST00000438548 490 ntBASIC3.42□□□□□ -1.86
CD74P04233 MTCYBP12-201ENST00000440559 1134 ntBASIC3.42□□□□□ -1.86
CD74P04233 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.42□□□□□ -1.86
CD74P04233 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.42□□□□□ -1.86
CD74P04233 TPT1P13-201ENST00000449760 499 ntBASIC3.42□□□□□ -1.86
CD74P04233 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.42□□□□□ -1.86
CD74P04233 SNORD108-201ENST00000459332 71 ntBASIC3.42□□□□□ -1.86
CD74P04233 AC010326.1-201ENST00000462726 602 ntBASIC3.42□□□□□ -1.86
CD74P04233 RPL5P13-201ENST00000462840 709 ntBASIC3.42□□□□□ -1.86
CD74P04233 RPL9P32-201ENST00000464118 620 ntBASIC3.42□□□□□ -1.86
CD74P04233 RPL21P126-201ENST00000470049 478 ntBASIC3.42□□□□□ -1.86
CD74P04233 RPL7P24-201ENST00000493052 752 ntBASIC3.42□□□□□ -1.86
CD74P04233 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.42□□□□□ -1.86
CD74P04233 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC3.42□□□□□ -1.86
CD74P04233 OR4C2P-201ENST00000530855 1064 ntBASIC3.42□□□□□ -1.86
CD74P04233 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.42□□□□□ -1.86
CD74P04233 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC3.42□□□□□ -1.86
CD74P04233 NPM1P47-201ENST00000560843 856 ntBASIC3.42□□□□□ -1.86
CD74P04233 AC084783.1-201ENST00000565846 910 ntBASIC3.42□□□□□ -1.86
CD74P04233 AF230666.2-201ENST00000602328 725 ntBASIC3.42□□□□□ -1.86
CD74P04233 AC068790.7-201ENST00000602347 528 ntBASIC3.42□□□□□ -1.86
CD74P04233 AC093765.1-201ENST00000603758 881 ntBASIC3.42□□□□□ -1.86
CD74P04233 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.42□□□□□ -1.86
CD74P04233 AC012409.3-201ENST00000611343 981 ntBASIC3.42□□□□□ -1.86
CD74P04233 AC099669.2-201ENST00000616549 437 ntBASIC3.42□□□□□ -1.86
CD74P04233 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.42□□□□□ -1.86
CD74P04233 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.42□□□□□ -1.86
CD74P04233 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CD74P04233 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CD74P04233 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.42□□□□□ -1.86
CD74P04233 AP000346.3-201ENST00000622821 210 ntBASIC3.42□□□□□ -1.86
CD74P04233 AC116563.2-201ENST00000624751 535 ntBASIC3.42□□□□□ -1.86
CD74P04233 AL139254.3-201ENST00000641097 674 ntBASIC3.42□□□□□ -1.86
CD74P04233 AC119674.1-220ENST00000641502 1048 ntBASIC3.42□□□□□ -1.86
CD74P04233 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
CD74P04233 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
CD74P04233 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.42□□□□□ -1.86
CD74P04233 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
CD74P04233 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC3.41□□□□□ -1.86
CD74P04233 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.41□□□□□ -1.86
CD74P04233 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CD74P04233 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
CD74P04233 RAD17P1-201ENST00000418130 2042 ntBASIC3.41□□□□□ -1.86
CD74P04233 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
CD74P04233 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.41□□□□□ -1.86
CD74P04233 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CD74P04233 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CD74P04233 RNU6-398P-201ENST00000384143 109 ntBASIC3.41□□□□□ -1.86
CD74P04233 MIR141-201ENST00000384975 95 ntBASIC3.41□□□□□ -1.86
CD74P04233 RPS16P5-201ENST00000406501 404 ntBASIC3.41□□□□□ -1.86
CD74P04233 HYKK-202ENST00000408962 847 ntTSL 5 BASIC3.41□□□□□ -1.86
CD74P04233 RNA5SP36-201ENST00000410197 133 ntBASIC3.41□□□□□ -1.86
CD74P04233 RPS20P25-201ENST00000412447 352 ntBASIC3.41□□□□□ -1.86
CD74P04233 AC016397.1-201ENST00000412463 242 ntBASIC3.41□□□□□ -1.86
CD74P04233 RPL23AP26-201ENST00000412728 464 ntBASIC3.41□□□□□ -1.86
CD74P04233 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.41□□□□□ -1.86
CD74P04233 RPL31P45-201ENST00000419532 356 ntBASIC3.41□□□□□ -1.86
CD74P04233 MFSD13B-201ENST00000420133 1290 ntBASIC3.41□□□□□ -1.86
CD74P04233 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.41□□□□□ -1.86
CD74P04233 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CD74P04233 BMS1P19-201ENST00000433925 393 ntBASIC3.41□□□□□ -1.86
CD74P04233 FTH1P16-201ENST00000435241 552 ntBASIC3.41□□□□□ -1.86
CD74P04233 TPMTP4-201ENST00000450749 678 ntBASIC3.41□□□□□ -1.86
CD74P04233 MTCO3P16-201ENST00000454456 754 ntBASIC3.41□□□□□ -1.86
CD74P04233 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.41□□□□□ -1.86
CD74P04233 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.41□□□□□ -1.86
CD74P04233 NIPA2P2-201ENST00000496376 1083 ntBASIC3.41□□□□□ -1.86
CD74P04233 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.41□□□□□ -1.86
CD74P04233 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.41□□□□□ -1.86
CD74P04233 KRT19P6-201ENST00000510983 209 ntBASIC3.41□□□□□ -1.86
CD74P04233 AC021146.1-201ENST00000511202 716 ntBASIC3.41□□□□□ -1.86
CD74P04233 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.41□□□□□ -1.86
CD74P04233 USP9YP5-201ENST00000511770 630 ntBASIC3.41□□□□□ -1.86
CD74P04233 KCTD9P2-201ENST00000512203 1013 ntBASIC3.41□□□□□ -1.86
CD74P04233 AC108120.2-201ENST00000512973 294 ntBASIC3.41□□□□□ -1.86
CD74P04233 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms