Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.46□□□□□ -1.7
CHRNA1P02708 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC4.46□□□□□ -1.7
CHRNA1P02708 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CHRNA1P02708 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CHRNA1P02708 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHRNA1P02708 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHRNA1P02708 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CHRNA1P02708 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
CHRNA1P02708 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.46□□□□□ -1.7
CHRNA1P02708 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CHRNA1P02708 OR11H5P-202ENST00000641612 1325 ntBASIC4.46□□□□□ -1.7
CHRNA1P02708 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHRNA1P02708 AC027290.2-201ENST00000623210 18662 ntBASIC4.45□□□□□ -1.7
CHRNA1P02708 AC007390.2-201ENST00000606229 3803 ntBASIC4.45□□□□□ -1.7
CHRNA1P02708 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CHRNA1P02708 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.45□□□□□ -1.7
CHRNA1P02708 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHRNA1P02708 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHRNA1P02708 SNORA60-201ENST00000362396 134 ntBASIC4.45□□□□□ -1.7
CHRNA1P02708 RNA5SP502-201ENST00000362694 119 ntBASIC4.45□□□□□ -1.7
CHRNA1P02708 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.45□□□□□ -1.7
CHRNA1P02708 RPS6P12-201ENST00000432491 726 ntBASIC4.45□□□□□ -1.7
CHRNA1P02708 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CHRNA1P02708 RNU7-27P-201ENST00000459281 62 ntBASIC4.45□□□□□ -1.7
CHRNA1P02708 AC012158.1-204ENST00000483430 465 ntBASIC4.45□□□□□ -1.7
CHRNA1P02708 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.45□□□□□ -1.7
CHRNA1P02708 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.45□□□□□ -1.7
CHRNA1P02708 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.45□□□□□ -1.7
CHRNA1P02708 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC4.45□□□□□ -1.7
CHRNA1P02708 RNU6-889P-201ENST00000517189 103 ntBASIC4.45□□□□□ -1.7
CHRNA1P02708 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC4.45□□□□□ -1.7
CHRNA1P02708 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.45□□□□□ -1.7
CHRNA1P02708 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.45□□□□□ -1.7
CHRNA1P02708 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.45□□□□□ -1.7
CHRNA1P02708 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.45□□□□□ -1.7
CHRNA1P02708 AC012414.2-201ENST00000559474 187 ntBASIC4.45□□□□□ -1.7
CHRNA1P02708 SLC25A36P1-201ENST00000590111 465 ntBASIC4.45□□□□□ -1.7
CHRNA1P02708 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHRNA1P02708 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.45□□□□□ -1.7
CHRNA1P02708 AC114878.2-201ENST00000604863 1251 ntBASIC4.45□□□□□ -1.7
CHRNA1P02708 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHRNA1P02708 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CHRNA1P02708 AC017002.4-201ENST00000604721 1525 ntBASIC4.45□□□□□ -1.7
CHRNA1P02708 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.45□□□□□ -1.7
CHRNA1P02708 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.45□□□□□ -1.7
CHRNA1P02708 AL359715.4-201ENST00000606629 1436 ntBASIC4.45□□□□□ -1.7
CHRNA1P02708 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
CHRNA1P02708 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHRNA1P02708 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHRNA1P02708 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.44□□□□□ -1.7
CHRNA1P02708 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.44□□□□□ -1.7
CHRNA1P02708 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.44□□□□□ -1.7
CHRNA1P02708 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.44□□□□□ -1.7
CHRNA1P02708 RNU1-108P-201ENST00000362556 161 ntBASIC4.44□□□□□ -1.7
CHRNA1P02708 AL590704.1-201ENST00000402856 794 ntBASIC4.44□□□□□ -1.7
CHRNA1P02708 RNA5SP44-201ENST00000410446 133 ntBASIC4.44□□□□□ -1.7
CHRNA1P02708 RAB9AP3-201ENST00000412737 573 ntBASIC4.44□□□□□ -1.7
CHRNA1P02708 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHRNA1P02708 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.44□□□□□ -1.7
CHRNA1P02708 TRGV6-201ENST00000417928 299 ntBASIC4.44□□□□□ -1.7
CHRNA1P02708 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHRNA1P02708 AC006946.1-201ENST00000429106 328 ntBASIC4.44□□□□□ -1.7
CHRNA1P02708 AL035246.1-201ENST00000433554 1255 ntBASIC4.44□□□□□ -1.7
CHRNA1P02708 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHRNA1P02708 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.44□□□□□ -1.7
CHRNA1P02708 RAB9AP1-201ENST00000449393 573 ntBASIC4.44□□□□□ -1.7
CHRNA1P02708 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.44□□□□□ -1.7
CHRNA1P02708 OR9M1P-201ENST00000459641 921 ntBASIC4.44□□□□□ -1.7
CHRNA1P02708 AC092691.2-201ENST00000461787 803 ntBASIC4.44□□□□□ -1.7
CHRNA1P02708 CMAHP-205ENST00000471416 1118 ntTSL 2 BASIC4.44□□□□□ -1.7
CHRNA1P02708 HMGB1P3-201ENST00000502802 616 ntBASIC4.44□□□□□ -1.7
CHRNA1P02708 RNU6-1308P-201ENST00000516817 103 ntBASIC4.44□□□□□ -1.7
CHRNA1P02708 TRMT10BP1-201ENST00000519377 943 ntBASIC4.44□□□□□ -1.7
CHRNA1P02708 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC4.44□□□□□ -1.7
CHRNA1P02708 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.44□□□□□ -1.7
CHRNA1P02708 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC4.44□□□□□ -1.7
CHRNA1P02708 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.44□□□□□ -1.7
CHRNA1P02708 RPL23AP87-202ENST00000573039 466 ntBASIC4.44□□□□□ -1.7
CHRNA1P02708 AC025627.2-201ENST00000576220 160 ntBASIC4.44□□□□□ -1.7
CHRNA1P02708 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.44□□□□□ -1.7
CHRNA1P02708 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHRNA1P02708 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.44□□□□□ -1.7
CHRNA1P02708 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.44□□□□□ -1.7
CHRNA1P02708 AC024220.1-201ENST00000603675 484 ntBASIC4.44□□□□□ -1.7
CHRNA1P02708 BX322635.1-201ENST00000605804 496 ntBASIC4.44□□□□□ -1.7
CHRNA1P02708 AL391834.1-201ENST00000609609 560 ntBASIC4.44□□□□□ -1.7
CHRNA1P02708 AC090246.1-201ENST00000616499 426 ntBASIC4.44□□□□□ -1.7
CHRNA1P02708 AC000123.2-201ENST00000623124 461 ntBASIC4.44□□□□□ -1.7
CHRNA1P02708 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.44□□□□□ -1.7
CHRNA1P02708 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CHRNA1P02708 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.44□□□□□ -1.7
CHRNA1P02708 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHRNA1P02708 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CHRNA1P02708 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CHRNA1P02708 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHRNA1P02708 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CHRNA1P02708 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHRNA1P02708 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.43□□□□□ -1.7
CHRNA1P02708 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CHRNA1P02708 RNU6-304P-201ENST00000364855 107 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms