Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 SETP12-201ENST00000514068 805 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 MTND4LP24-201ENST00000572277 291 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AC099489.2-201ENST00000574976 260 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AC115085.1-201ENST00000588924 229 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AL133338.2-201ENST00000604292 736 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AL049539.1-201ENST00000611964 459 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 RNVU1-4-201ENST00000612985 164 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AC123768.4-201ENST00000616244 701 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 MIR6891-201ENST00000618788 93 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AC007546.1-201ENST00000619452 559 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AP003072.4-201ENST00000624580 310 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 AC009951.1-201ENST00000623674 2614 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 CR381670.1-201ENST00000624291 1693 ntBASIC3.1□□□□□ -1.91
HLA-DQA1P01909 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.1□□□□□ -1.91
HLA-DQA1P01909 MFSD8-216ENST00000641147 4009 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 TNPO1P3-201ENST00000436471 2662 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 AC006504.1-201ENST00000562493 3666 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 RAD1P1-201ENST00000231383 813 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 RNU6-1005P-201ENST00000384519 107 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 RNA5SP239-201ENST00000410218 129 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 RNU2-17P-201ENST00000410290 190 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 TCEA1P4-201ENST00000415066 844 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 AC023128.2-201ENST00000420880 1223 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 AC005154.2-201ENST00000438110 379 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 YWHAZP2-201ENST00000440317 728 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 AL353093.1-201ENST00000441292 436 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 AC006326.1-201ENST00000445465 787 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 TPTE2P6-202ENST00000445572 1007 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 AC069540.1-201ENST00000446320 988 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 TPMTP4-201ENST00000450749 678 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 RPL36AP13-201ENST00000457490 317 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 RN7SL354P-201ENST00000469282 294 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 AP000926.1-201ENST00000479573 241 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 LINC00557-201ENST00000563184 1279 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 MIR4737-201ENST00000583979 81 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 AC024940.4-201ENST00000605507 246 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 AL021997.2-201ENST00000615674 271 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 AC000123.2-201ENST00000623124 461 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 AC024023.1-201ENST00000624530 922 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 CR392039.4-201ENST00000624968 501 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 FRG1DP-201ENST00000635586 771 ntBASIC3.09□□□□□ -1.91
HLA-DQA1P01909 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.09□□□□□ -1.91
HLA-DQA1P01909 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
HLA-DQA1P01909 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
HLA-DQA1P01909 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC3.09□□□□□ -1.92
HLA-DQA1P01909 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 MIR3065-201ENST00000390137 79 ntBASIC3.08□□□□□ -1.92
HLA-DQA1P01909 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
HLA-DQA1P01909 HMGB1P13-201ENST00000406019 642 ntBASIC3.08□□□□□ -1.92
HLA-DQA1P01909 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms