Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 PTP4A1P1-201ENST00000420539 515 ntBASIC3.65□□□□□ -1.83
TNFP01375 AL034379.1-201ENST00000423216 253 ntBASIC3.65□□□□□ -1.83
TNFP01375 AC006946.1-201ENST00000429106 328 ntBASIC3.65□□□□□ -1.83
TNFP01375 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.65□□□□□ -1.83
TNFP01375 AC011742.1-201ENST00000431448 434 ntBASIC3.65□□□□□ -1.83
TNFP01375 BX119904.1-201ENST00000432026 348 ntBASIC3.65□□□□□ -1.83
TNFP01375 HMGN2P31-201ENST00000432430 273 ntBASIC3.65□□□□□ -1.83
TNFP01375 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.65□□□□□ -1.83
TNFP01375 CCDC75P1-201ENST00000469247 791 ntBASIC3.65□□□□□ -1.83
TNFP01375 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TNFP01375 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC3.65□□□□□ -1.83
TNFP01375 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC3.65□□□□□ -1.83
TNFP01375 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.65□□□□□ -1.83
TNFP01375 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.65□□□□□ -1.83
TNFP01375 VWA8P1-201ENST00000510889 176 ntBASIC3.65□□□□□ -1.83
TNFP01375 SUMO2P20-201ENST00000520803 283 ntBASIC3.65□□□□□ -1.83
TNFP01375 AC018442.3-201ENST00000523025 183 ntBASIC3.65□□□□□ -1.83
TNFP01375 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC3.65□□□□□ -1.83
TNFP01375 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.65□□□□□ -1.83
TNFP01375 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.65□□□□□ -1.83
TNFP01375 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC3.65□□□□□ -1.83
TNFP01375 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.65□□□□□ -1.83
TNFP01375 RN7SL371P-201ENST00000578099 267 ntBASIC3.65□□□□□ -1.83
TNFP01375 AC008638.3-201ENST00000603341 463 ntBASIC3.65□□□□□ -1.83
TNFP01375 U3.45-201ENST00000607547 219 ntBASIC3.65□□□□□ -1.83
TNFP01375 AP003392.5-201ENST00000607857 415 ntBASIC3.65□□□□□ -1.83
TNFP01375 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.65□□□□□ -1.83
TNFP01375 AC016957.2-201ENST00000616998 848 ntBASIC3.65□□□□□ -1.83
TNFP01375 AC079684.1-201ENST00000621405 437 ntBASIC3.65□□□□□ -1.83
TNFP01375 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
TNFP01375 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
TNFP01375 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC3.65□□□□□ -1.83
TNFP01375 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
TNFP01375 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.65□□□□□ -1.83
TNFP01375 AC018529.3-201ENST00000624212 2254 ntBASIC3.64□□□□□ -1.83
TNFP01375 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
TNFP01375 AC093535.2-201ENST00000624769 2326 ntBASIC3.64□□□□□ -1.83
TNFP01375 RHOT1P2-201ENST00000366423 333 ntBASIC3.64□□□□□ -1.83
TNFP01375 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.64□□□□□ -1.83
TNFP01375 MIR218-2-201ENST00000385006 110 ntBASIC3.64□□□□□ -1.83
TNFP01375 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.64□□□□□ -1.83
TNFP01375 JKAMPP1-201ENST00000413804 919 ntBASIC3.64□□□□□ -1.83
TNFP01375 HIGD1AP12-201ENST00000427832 281 ntBASIC3.64□□□□□ -1.83
TNFP01375 AL353748.1-201ENST00000440753 474 ntBASIC3.64□□□□□ -1.83
TNFP01375 SEPT14P1-201ENST00000458703 648 ntBASIC3.64□□□□□ -1.83
TNFP01375 SNORD105B-201ENST00000458770 79 ntBASIC3.64□□□□□ -1.83
TNFP01375 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.64□□□□□ -1.83
TNFP01375 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC3.64□□□□□ -1.83
TNFP01375 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.64□□□□□ -1.83
TNFP01375 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.64□□□□□ -1.83
TNFP01375 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.64□□□□□ -1.83
TNFP01375 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC3.64□□□□□ -1.83
TNFP01375 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.64□□□□□ -1.83
TNFP01375 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.64□□□□□ -1.83
TNFP01375 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.64□□□□□ -1.83
TNFP01375 AL139395.1-201ENST00000603662 160 ntBASIC3.64□□□□□ -1.83
TNFP01375 AC092354.2-201ENST00000607786 514 ntBASIC3.64□□□□□ -1.83
TNFP01375 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.64□□□□□ -1.83
TNFP01375 AC084757.4-201ENST00000616350 526 ntBASIC3.64□□□□□ -1.83
TNFP01375 AC074276.2-201ENST00000619891 348 ntBASIC3.64□□□□□ -1.83
TNFP01375 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.64□□□□□ -1.83
TNFP01375 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
TNFP01375 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
TNFP01375 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
TNFP01375 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.64□□□□□ -1.83
TNFP01375 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
TNFP01375 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
TNFP01375 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TNFP01375 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TNFP01375 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
TNFP01375 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TNFP01375 AC074029.4-201ENST00000624796 1859 ntBASIC3.63□□□□□ -1.83
TNFP01375 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.63□□□□□ -1.83
TNFP01375 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TNFP01375 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
TNFP01375 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
TNFP01375 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
TNFP01375 HSPD1P16-201ENST00000402302 394 ntBASIC3.63□□□□□ -1.83
TNFP01375 RNA5SP44-201ENST00000410446 133 ntBASIC3.63□□□□□ -1.83
TNFP01375 RNA5SP306-201ENST00000411087 107 ntBASIC3.63□□□□□ -1.83
TNFP01375 ATP5A1P2-201ENST00000412323 255 ntBASIC3.63□□□□□ -1.83
TNFP01375 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.63□□□□□ -1.83
TNFP01375 AC093578.1-201ENST00000415219 368 ntBASIC3.63□□□□□ -1.83
TNFP01375 CRYBB2P1-203ENST00000415709 538 ntBASIC3.63□□□□□ -1.83
TNFP01375 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.63□□□□□ -1.83
TNFP01375 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC3.63□□□□□ -1.83
TNFP01375 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
TNFP01375 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.63□□□□□ -1.83
TNFP01375 AL162388.1-201ENST00000450912 352 ntBASIC3.63□□□□□ -1.83
TNFP01375 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.63□□□□□ -1.83
TNFP01375 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.63□□□□□ -1.83
TNFP01375 RPL7P49-201ENST00000471402 708 ntBASIC3.63□□□□□ -1.83
TNFP01375 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.63□□□□□ -1.83
TNFP01375 AC110768.1-201ENST00000509222 400 ntBASIC3.63□□□□□ -1.83
TNFP01375 RNA5SP208-201ENST00000516156 78 ntBASIC3.63□□□□□ -1.83
TNFP01375 AC090281.1-201ENST00000523019 276 ntBASIC3.63□□□□□ -1.83
TNFP01375 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC3.63□□□□□ -1.83
TNFP01375 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.63□□□□□ -1.83
TNFP01375 AC069200.1-201ENST00000609511 323 ntBASIC3.63□□□□□ -1.83
TNFP01375 AC012314.7-201ENST00000619693 93 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms