Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.44□□□□□ -1.7
CLDN3O15551 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.44□□□□□ -1.7
CLDN3O15551 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN3O15551 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.44□□□□□ -1.7
CLDN3O15551 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.44□□□□□ -1.7
CLDN3O15551 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.44□□□□□ -1.7
CLDN3O15551 NF1P5-201ENST00000588287 448 ntBASIC4.44□□□□□ -1.7
CLDN3O15551 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN3O15551 AC115085.1-201ENST00000588924 229 ntBASIC4.44□□□□□ -1.7
CLDN3O15551 ZNF92P3-201ENST00000596594 954 ntBASIC4.44□□□□□ -1.7
CLDN3O15551 AC067959.1-201ENST00000604334 379 ntBASIC4.44□□□□□ -1.7
CLDN3O15551 KATNBL1P1-201ENST00000605192 748 ntBASIC4.44□□□□□ -1.7
CLDN3O15551 AC010857.1-201ENST00000606398 594 ntBASIC4.44□□□□□ -1.7
CLDN3O15551 AC012603.1-201ENST00000606424 528 ntBASIC4.44□□□□□ -1.7
CLDN3O15551 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.44□□□□□ -1.7
CLDN3O15551 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.44□□□□□ -1.7
CLDN3O15551 AL158196.1-201ENST00000616786 434 ntBASIC4.44□□□□□ -1.7
CLDN3O15551 AL162233.1-201ENST00000620014 944 ntBASIC4.44□□□□□ -1.7
CLDN3O15551 AC067931.1-201ENST00000624190 671 ntBASIC4.44□□□□□ -1.7
CLDN3O15551 AP003072.4-201ENST00000624580 310 ntBASIC4.44□□□□□ -1.7
CLDN3O15551 CR392039.4-201ENST00000624968 501 ntBASIC4.44□□□□□ -1.7
CLDN3O15551 MIR6715B-201ENST00000637172 77 ntBASIC4.44□□□□□ -1.7
CLDN3O15551 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN3O15551 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
CLDN3O15551 RNF6P1-201ENST00000444889 1784 ntBASIC4.44□□□□□ -1.7
CLDN3O15551 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.44□□□□□ -1.7
CLDN3O15551 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.44□□□□□ -1.7
CLDN3O15551 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN3O15551 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN3O15551 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CLDN3O15551 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CLDN3O15551 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN3O15551 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.43□□□□□ -1.7
CLDN3O15551 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.43□□□□□ -1.7
CLDN3O15551 AL353743.4-201ENST00000422653 1547 ntBASIC4.43□□□□□ -1.7
CLDN3O15551 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN3O15551 MIR372-201ENST00000362225 67 ntBASIC4.43□□□□□ -1.7
CLDN3O15551 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN3O15551 RN7SKP263-201ENST00000411194 309 ntBASIC4.43□□□□□ -1.7
CLDN3O15551 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.43□□□□□ -1.7
CLDN3O15551 AL162151.2-201ENST00000448875 158 ntBASIC4.43□□□□□ -1.7
CLDN3O15551 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN3O15551 AL161747.1-201ENST00000480068 358 ntBASIC4.43□□□□□ -1.7
CLDN3O15551 HMGB3P14-201ENST00000494195 599 ntBASIC4.43□□□□□ -1.7
CLDN3O15551 PPM1AP1-201ENST00000502740 1135 ntBASIC4.43□□□□□ -1.7
CLDN3O15551 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN3O15551 AC025459.1-201ENST00000504072 156 ntBASIC4.43□□□□□ -1.7
CLDN3O15551 HMGB3P13-201ENST00000511263 607 ntBASIC4.43□□□□□ -1.7
CLDN3O15551 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.43□□□□□ -1.7
CLDN3O15551 AC108064.1-201ENST00000513791 460 ntBASIC4.43□□□□□ -1.7
CLDN3O15551 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.43□□□□□ -1.7
CLDN3O15551 MYL12AP1-201ENST00000518490 515 ntBASIC4.43□□□□□ -1.7
CLDN3O15551 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.43□□□□□ -1.7
CLDN3O15551 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.43□□□□□ -1.7
CLDN3O15551 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.43□□□□□ -1.7
CLDN3O15551 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.43□□□□□ -1.7
CLDN3O15551 AP003117.1-201ENST00000602771 554 ntBASIC4.43□□□□□ -1.7
CLDN3O15551 AC087190.4-201ENST00000574616 8334 ntBASIC4.43□□□□□ -1.7
CLDN3O15551 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
CLDN3O15551 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN3O15551 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CLDN3O15551 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN3O15551 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN3O15551 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CLDN3O15551 RNA5SP515-201ENST00000364570 118 ntBASIC4.42□□□□□ -1.7
CLDN3O15551 RNA5SP283-201ENST00000365604 119 ntBASIC4.42□□□□□ -1.7
CLDN3O15551 SNORA37-201ENST00000384504 129 ntBASIC4.42□□□□□ -1.7
CLDN3O15551 RNU6-628P-201ENST00000410675 107 ntBASIC4.42□□□□□ -1.7
CLDN3O15551 AC010385.1-201ENST00000412374 256 ntBASIC4.42□□□□□ -1.7
CLDN3O15551 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.42□□□□□ -1.7
CLDN3O15551 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN3O15551 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN3O15551 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN3O15551 GSTA7P-201ENST00000438425 448 ntBASIC4.42□□□□□ -1.7
CLDN3O15551 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN3O15551 AC069285.2-201ENST00000440210 275 ntBASIC4.42□□□□□ -1.7
CLDN3O15551 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN3O15551 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC4.42□□□□□ -1.7
CLDN3O15551 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN3O15551 UBTFL9-201ENST00000534504 1148 ntBASIC4.42□□□□□ -1.7
CLDN3O15551 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN3O15551 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN3O15551 OR8R1P-201ENST00000543943 764 ntBASIC4.42□□□□□ -1.7
CLDN3O15551 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN3O15551 AL109741.3-201ENST00000561748 592 ntBASIC4.42□□□□□ -1.7
CLDN3O15551 AGGF1P6-201ENST00000569213 976 ntBASIC4.42□□□□□ -1.7
CLDN3O15551 AC005242.1-201ENST00000585658 438 ntBASIC4.42□□□□□ -1.7
CLDN3O15551 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN3O15551 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN3O15551 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.42□□□□□ -1.7
CLDN3O15551 AL139395.1-201ENST00000603662 160 ntBASIC4.42□□□□□ -1.7
CLDN3O15551 MIR6868-201ENST00000611215 58 ntBASIC4.42□□□□□ -1.7
CLDN3O15551 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN3O15551 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.42□□□□□ -1.7
CLDN3O15551 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.42□□□□□ -1.7
CLDN3O15551 AC068254.2-201ENST00000623938 3577 ntBASIC4.42□□□□□ -1.7
CLDN3O15551 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN3O15551 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLDN3O15551 IQCB2P-201ENST00000401788 1633 ntBASIC4.42□□□□□ -1.7
CLDN3O15551 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms