Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AL121834.1-202ENST00000404494 277 ntBASIC4.33□□□□□ -1.72
MSH4O15457 RN7SKP156-201ENST00000410308 342 ntBASIC4.33□□□□□ -1.72
MSH4O15457 RPL26P37-201ENST00000411983 438 ntBASIC4.33□□□□□ -1.72
MSH4O15457 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.33□□□□□ -1.72
MSH4O15457 OR2X1P-201ENST00000421144 687 ntBASIC4.33□□□□□ -1.72
MSH4O15457 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.33□□□□□ -1.72
MSH4O15457 AL445584.1-201ENST00000431451 330 ntBASIC4.33□□□□□ -1.72
MSH4O15457 MRPS33P4-201ENST00000434892 317 ntBASIC4.33□□□□□ -1.72
MSH4O15457 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.33□□□□□ -1.72
MSH4O15457 AC243772.1-201ENST00000451620 410 ntBASIC4.33□□□□□ -1.72
MSH4O15457 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.33□□□□□ -1.72
MSH4O15457 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.33□□□□□ -1.72
MSH4O15457 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.33□□□□□ -1.72
MSH4O15457 AC022695.1-201ENST00000522089 237 ntBASIC4.33□□□□□ -1.72
MSH4O15457 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC4.33□□□□□ -1.72
MSH4O15457 AC107918.3-201ENST00000533272 382 ntBASIC4.33□□□□□ -1.72
MSH4O15457 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.33□□□□□ -1.72
MSH4O15457 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.33□□□□□ -1.72
MSH4O15457 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.33□□□□□ -1.72
MSH4O15457 AC034105.4-201ENST00000568304 277 ntBASIC4.33□□□□□ -1.72
MSH4O15457 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC4.33□□□□□ -1.72
MSH4O15457 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC4.33□□□□□ -1.72
MSH4O15457 MIMT1-201ENST00000597105 1050 ntBASIC4.33□□□□□ -1.72
MSH4O15457 BX322635.1-201ENST00000605804 496 ntBASIC4.33□□□□□ -1.72
MSH4O15457 AC015813.4-201ENST00000610469 179 ntBASIC4.33□□□□□ -1.72
MSH4O15457 AC020658.4-201ENST00000613987 684 ntBASIC4.33□□□□□ -1.72
MSH4O15457 AC079684.1-201ENST00000621405 437 ntBASIC4.33□□□□□ -1.72
MSH4O15457 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.33□□□□□ -1.72
MSH4O15457 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
MSH4O15457 AC104820.1-201ENST00000624183 307 ntBASIC4.33□□□□□ -1.72
MSH4O15457 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
MSH4O15457 IPO8P1-201ENST00000455509 3109 ntBASIC4.33□□□□□ -1.72
MSH4O15457 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.33□□□□□ -1.72
MSH4O15457 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
MSH4O15457 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
MSH4O15457 LINC01109-201ENST00000603837 3081 ntBASIC4.32□□□□□ -1.72
MSH4O15457 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
MSH4O15457 AC010329.2-201ENST00000595195 2737 ntBASIC4.32□□□□□ -1.72
MSH4O15457 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
MSH4O15457 AC006042.3-201ENST00000454684 1469 ntBASIC4.32□□□□□ -1.72
MSH4O15457 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
MSH4O15457 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
MSH4O15457 OR4A15-201ENST00000314706 1035 ntBASIC4.32□□□□□ -1.72
MSH4O15457 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
MSH4O15457 U8.11-201ENST00000384699 133 ntBASIC4.32□□□□□ -1.72
MSH4O15457 U8.12-201ENST00000384701 133 ntBASIC4.32□□□□□ -1.72
MSH4O15457 ZNF602P-201ENST00000405929 924 ntBASIC4.32□□□□□ -1.72
MSH4O15457 RN7SKP202-201ENST00000410439 330 ntBASIC4.32□□□□□ -1.72
MSH4O15457 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC4.32□□□□□ -1.72
MSH4O15457 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.32□□□□□ -1.72
MSH4O15457 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.32□□□□□ -1.72
MSH4O15457 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.32□□□□□ -1.72
MSH4O15457 AC096638.2-201ENST00000434965 711 ntBASIC4.32□□□□□ -1.72
MSH4O15457 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC4.32□□□□□ -1.72
MSH4O15457 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.32□□□□□ -1.72
MSH4O15457 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.32□□□□□ -1.72
MSH4O15457 RRM2P4-201ENST00000441721 562 ntBASIC4.32□□□□□ -1.72
MSH4O15457 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.32□□□□□ -1.72
MSH4O15457 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.32□□□□□ -1.72
MSH4O15457 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.32□□□□□ -1.72
MSH4O15457 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
MSH4O15457 NANOGP10-201ENST00000453325 895 ntBASIC4.32□□□□□ -1.72
MSH4O15457 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC4.32□□□□□ -1.72
MSH4O15457 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.32□□□□□ -1.72
MSH4O15457 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.32□□□□□ -1.72
MSH4O15457 U8.18-201ENST00000459285 133 ntBASIC4.32□□□□□ -1.72
MSH4O15457 RN7SL542P-201ENST00000467147 294 ntBASIC4.32□□□□□ -1.72
MSH4O15457 AC007688.1-201ENST00000475592 759 ntBASIC4.32□□□□□ -1.72
MSH4O15457 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.32□□□□□ -1.72
MSH4O15457 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC4.32□□□□□ -1.72
MSH4O15457 AC016550.3-201ENST00000515706 767 ntBASIC4.32□□□□□ -1.72
MSH4O15457 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.32□□□□□ -1.72
MSH4O15457 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.32□□□□□ -1.72
MSH4O15457 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC4.32□□□□□ -1.72
MSH4O15457 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC4.32□□□□□ -1.72
MSH4O15457 AC090877.1-201ENST00000561418 344 ntBASIC4.32□□□□□ -1.72
MSH4O15457 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC4.32□□□□□ -1.72
MSH4O15457 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.32□□□□□ -1.72
MSH4O15457 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.32□□□□□ -1.72
MSH4O15457 MRPS35P3-201ENST00000603189 709 ntBASIC4.32□□□□□ -1.72
MSH4O15457 AC074276.2-201ENST00000619891 348 ntBASIC4.32□□□□□ -1.72
MSH4O15457 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC4.32□□□□□ -1.72
MSH4O15457 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.32□□□□□ -1.72
MSH4O15457 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.32□□□□□ -1.72
MSH4O15457 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
MSH4O15457 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
MSH4O15457 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.32□□□□□ -1.72
MSH4O15457 C2orf16-202ENST00000447166 16401 ntAPPRIS ALT2 TSL 3 BASIC4.32□□□□□ -1.72
MSH4O15457 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MSH4O15457 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
MSH4O15457 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.31□□□□□ -1.72
MSH4O15457 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MSH4O15457 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
MSH4O15457 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
MSH4O15457 LAP3P1-201ENST00000403648 294 ntBASIC4.31□□□□□ -1.72
MSH4O15457 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.31□□□□□ -1.72
MSH4O15457 JKAMPP1-201ENST00000413804 919 ntBASIC4.31□□□□□ -1.72
MSH4O15457 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.31□□□□□ -1.72
MSH4O15457 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.31□□□□□ -1.72
MSH4O15457 AL139247.1-201ENST00000422768 325 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 165.9 ms