Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 PCNAP1-202ENST00000595299 752 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 AC125494.3-201ENST00000602759 455 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 BNIP3P19-201ENST00000605397 577 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 AC083809.1-201ENST00000615051 472 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 AC020978.9-201ENST00000624380 1141 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 AC106730.3-201ENST00000624568 641 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 U6.107-201ENST00000637108 79 ntBASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.1□□□□□ -1.75
ATG4BQ9Y4P1 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 AC136624.1-201ENST00000400791 413 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 VN1R8P-201ENST00000407739 893 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 EIF4EP1-201ENST00000422311 642 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 AC073335.1-201ENST00000427776 363 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 UBE2V1P6-201ENST00000430840 422 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 AC023347.2-201ENST00000433994 462 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 TPTE2P6-202ENST00000445572 1007 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 RPL6P5-201ENST00000445678 828 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 ABCF2P2-201ENST00000450549 296 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 AL035404.1-201ENST00000497982 568 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 FTH1P24-201ENST00000503502 462 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 AC112518.2-201ENST00000508565 425 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 RNU6-334P-201ENST00000517072 102 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 MYL12AP1-201ENST00000518490 515 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 OR4U1P-201ENST00000554958 912 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 AC090312.2-201ENST00000582687 378 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 NTAN1P1-201ENST00000603150 646 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 AL445423.1-201ENST00000609941 536 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 MIR8084-201ENST00000614105 89 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 AC243756.2-201ENST00000618406 463 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 AL121890.3-201ENST00000618494 516 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 AC019278.1-201ENST00000623516 479 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 MFSD8-213ENST00000641134 1327 ntBASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
ATG4BQ9Y4P1 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.09□□□□□ -1.76
ATG4BQ9Y4P1 EIF2AP4-201ENST00000424793 1781 ntBASIC4.09□□□□□ -1.76
ATG4BQ9Y4P1 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
ATG4BQ9Y4P1 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
ATG4BQ9Y4P1 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 FAM3C2-201ENST00000312214 681 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 OR4K17-201ENST00000315543 1032 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 RNU1-15P-201ENST00000353977 144 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 MIR708-201ENST00000390708 88 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 AL158050.1-201ENST00000416077 457 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 MTND2P15-201ENST00000418575 892 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 UBE2D3P3-201ENST00000426992 425 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 RPS29P17-201ENST00000430795 166 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 AL132765.1-201ENST00000434165 553 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 CBX1P1-201ENST00000440184 427 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 YWHAQP9-201ENST00000445891 512 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 AL121877.1-201ENST00000453704 622 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 RPL7P32-201ENST00000457119 744 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 TRBV8-2-201ENST00000475637 270 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 SETP6-201ENST00000479329 568 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 HMGB1P21-201ENST00000502313 581 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 AC100871.1-201ENST00000507871 1456 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 RN7SKP82-201ENST00000516786 223 ntBASIC4.08□□□□□ -1.76
ATG4BQ9Y4P1 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms